Homologs in group_2850

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10300 FBDBKF_10300 86.7 Morganella morganii S1 yibL YibL family ribosome-associated protein
EHELCC_14635 EHELCC_14635 86.7 Morganella morganii S2 yibL YibL family ribosome-associated protein
NLDBIP_14465 NLDBIP_14465 86.7 Morganella morganii S4 yibL YibL family ribosome-associated protein
LHKJJB_14880 LHKJJB_14880 86.7 Morganella morganii S3 yibL YibL family ribosome-associated protein
HKOGLL_13500 HKOGLL_13500 86.7 Morganella morganii S5 yibL YibL family ribosome-associated protein

Distribution of the homologs in the orthogroup group_2850

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2850

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ADK8 1.07e-56 174 71 0 120 1 yibL Uncharacterized protein YibL Escherichia coli (strain K12)
P0ADK9 1.07e-56 174 71 0 120 4 yibL Uncharacterized protein YibL Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ADL0 1.07e-56 174 71 0 120 4 yibL Uncharacterized protein YibL Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS13975
Feature type CDS
Gene -
Product YibL family ribosome-associated protein
Location 5415 - 5777 (strand: 1)
Length 363 (nucleotides) / 120 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000004
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2850
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF10928 Protein of unknown function (DUF2810)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K14762 ribosome-associated protein - -

Protein Sequence

MKEIEKAQIKLLNDRLDLIRHKMAGMQLTNEAEKHAELEKEKAALEIEIVRLKAVRSNKLSKEAQKLVDMPFKRPITKKEQADIGKLKKAVRGLIIVHPMTALGREMGLDDMTGFSKTDF

Flanking regions ( +/- flanking 50bp)

CCGAATGGTGTATACTTGCCGACAAGAAATTTATTCACGGTTAATTAATAATGAAAGAAATCGAAAAAGCACAAATTAAACTTCTTAACGACCGTTTAGACCTTATCCGTCACAAGATGGCGGGTATGCAGCTGACGAACGAAGCGGAAAAGCATGCAGAGCTTGAGAAAGAAAAAGCGGCGCTGGAAATTGAAATTGTTCGTCTGAAGGCGGTACGTAGCAATAAACTAAGCAAAGAAGCGCAGAAGTTAGTGGATATGCCATTCAAACGCCCTATCACTAAGAAAGAACAAGCTGATATTGGCAAGCTGAAGAAAGCCGTGCGAGGCTTGATAATTGTCCATCCAATGACGGCATTAGGTCGCGAAATGGGACTGGATGATATGACCGGTTTTTCTAAGACTGATTTTTAGTCAGAAAATCAACCCGGCTAAAACATACCCCTCAGTGTCAGCATAATTGT