PF09482


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF09482
Protein list: lists the 7 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF09482
Description Bacterial type III secretion apparatus protein (OrgA_MxiK)

Occurence in the database

PF09482 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1516 FBDBKF_09380 106197 106760 1 Type III secretion apparatus protein OrgA/MxiK Morganella morganii S1
1 group_1516 EHELCC_10030 39344 39907 -1 Type III secretion apparatus protein OrgA/MxiK Morganella morganii S2
2 group_1516 NLDBIP_10375 17615 18178 -1 Type III secretion apparatus protein OrgA/MxiK Morganella morganii S4
3 group_1516 LHKJJB_10980 173350 173913 1 Type III secretion apparatus protein OrgA/MxiK Morganella morganii S3
4 group_1516 HKOGLL_14040 106651 107214 1 Type III secretion apparatus protein OrgA/MxiK Morganella morganii S5
5 group_1516 F4V73_RS10585 248384 248947 -1 hypothetical protein Morganella psychrotolerans
6 group_1516 PMI_RS13315 2953170 2953742 1 type III secretion protein Proteus mirabilis HI4320