Homologs in group_1463

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09380 FBDBKF_09380 51.4 Morganella morganii S1 - Type III secretion apparatus protein OrgA/MxiK
EHELCC_10030 EHELCC_10030 51.4 Morganella morganii S2 - Type III secretion apparatus protein OrgA/MxiK
NLDBIP_10375 NLDBIP_10375 51.4 Morganella morganii S4 - Type III secretion apparatus protein OrgA/MxiK
LHKJJB_10980 LHKJJB_10980 51.4 Morganella morganii S3 - Type III secretion apparatus protein OrgA/MxiK
HKOGLL_14040 HKOGLL_14040 51.4 Morganella morganii S5 - Type III secretion apparatus protein OrgA/MxiK
PMI_RS13315 PMI_RS13315 29.9 Proteus mirabilis HI4320 - type III secretion protein

Distribution of the homologs in the orthogroup group_1463

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1463

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10585
Feature type CDS
Gene -
Product hypothetical protein
Location 248384 - 248947 (strand: -1)
Length 564 (nucleotides) / 187 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1463
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK)

Protein Sequence

MDNQPDIQAAITRVMYQPSGYLHSSRRFSDLPQDDSLHGKVTNAAILNRYQLPLNIDFDAGSQHAMLLLLNWTQLPRVCDYLGKLIRYHYGLPDDSPPDNTQRAFLSLCPVLSLPDWPAAQTFTDDNNIADPGITAMTQLMHQFSPALSARLPLMFDTQLSFMDKNTIPALPYSLFQLVFLYVPFTS

Flanking regions ( +/- flanking 50bp)

GCAGCGTTCCCGCATCCGGACATTTTTAATAAACCTGCGGGAAAAGCGTAATGGATAACCAACCGGATATACAGGCAGCCATTACCCGCGTGATGTATCAGCCATCCGGTTACCTGCACAGCAGCCGCCGATTTTCAGACTTGCCGCAGGATGATTCACTTCATGGCAAAGTGACTAATGCGGCAATTCTGAACAGGTACCAACTTCCGCTGAATATCGATTTTGATGCCGGTTCTCAACATGCGATGCTACTGCTGCTCAACTGGACACAATTACCGCGGGTTTGTGACTATCTGGGAAAACTGATTCGCTATCATTATGGTTTACCGGATGATTCACCACCGGATAATACACAGCGCGCATTTCTGTCATTATGTCCGGTGCTGTCTCTGCCTGACTGGCCGGCAGCGCAGACATTTACGGATGACAATAACATCGCCGATCCCGGTATTACCGCCATGACTCAGCTGATGCACCAATTCTCACCGGCACTCTCTGCCAGGCTGCCACTGATGTTTGATACACAGTTATCCTTTATGGATAAAAATACGATCCCGGCACTTCCTTATTCACTTTTTCAACTGGTATTTCTCTATGTGCCGTTCACTTCCTGAATCACTGATTTCTCATCTCCGCCACGGGGTTGTGATTAAGCAGGCCAACA