Homologs in group_1516

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_10030 EHELCC_10030 100.0 Morganella morganii S2 - Type III secretion apparatus protein OrgA/MxiK
NLDBIP_10375 NLDBIP_10375 100.0 Morganella morganii S4 - Type III secretion apparatus protein OrgA/MxiK
LHKJJB_10980 LHKJJB_10980 100.0 Morganella morganii S3 - Type III secretion apparatus protein OrgA/MxiK
HKOGLL_14040 HKOGLL_14040 100.0 Morganella morganii S5 - Type III secretion apparatus protein OrgA/MxiK
F4V73_RS10585 F4V73_RS10585 51.4 Morganella psychrotolerans - hypothetical protein
PMI_RS13315 PMI_RS13315 30.1 Proteus mirabilis HI4320 - type III secretion protein

Distribution of the homologs in the orthogroup group_1516

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1516

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_09380
Feature type CDS
Gene -
Product Type III secretion apparatus protein OrgA/MxiK
Location 106197 - 106760 (strand: 1)
Length 564 (nucleotides) / 187 (amino acids)
In genomic island -

Contig

Accession contig_10
Length 146103 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1516
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK)

Protein Sequence

MNDRFDIQGAVTRVMYQPADYLHSSRLFGGLPAAAQSASYRRMQNAAIMDHYRLPRERDFDLFSPLVIPLMRHWQQLPAVSCYLDMFIRRAYSLPDNTVPDLSQQAFLSLSPVLPLPEWPQADKQPDIPAVLPGQIAMTQLLSGFSPALAARFQLMTDASLSPADIRLPHLPDSLLPLVLHYVPFTA

Flanking regions ( +/- flanking 50bp)

CTGCCGTGCACAATTACGGGCATTTCTGATGCGGCGGAAGGTAAAACAGCATGAATGACCGGTTTGATATACAGGGCGCGGTCACGCGGGTGATGTACCAGCCGGCGGATTATCTGCACAGCAGCCGCTTGTTCGGCGGATTACCGGCGGCGGCACAATCGGCGTCTTACCGCAGAATGCAGAACGCAGCTATTATGGATCACTACCGGCTGCCGCGTGAGAGGGATTTTGATCTGTTCTCCCCGCTGGTTATCCCGCTGATGCGCCACTGGCAGCAGCTTCCGGCCGTCAGCTGTTACCTGGATATGTTCATCCGCCGGGCTTACAGCCTGCCGGATAATACCGTGCCGGATTTATCACAACAGGCATTTTTATCTCTGAGCCCCGTACTGCCACTGCCGGAGTGGCCACAAGCAGACAAACAGCCGGATATTCCGGCAGTCCTGCCCGGCCAGATTGCCATGACACAGTTATTATCCGGTTTTTCTCCTGCGCTGGCAGCCCGCTTTCAGCTGATGACGGATGCATCCTTGTCACCGGCAGACATCCGGCTTCCGCATCTGCCCGATTCACTTTTACCTTTGGTATTACATTATGTGCCGTTCACTGCCTGATTCCCTGCTGTCACATATCAGACACGGTGTGCTGATTAAAGATCGCCATG