Homologs in group_1516

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09380 FBDBKF_09380 30.1 Morganella morganii S1 - Type III secretion apparatus protein OrgA/MxiK
EHELCC_10030 EHELCC_10030 30.1 Morganella morganii S2 - Type III secretion apparatus protein OrgA/MxiK
NLDBIP_10375 NLDBIP_10375 30.1 Morganella morganii S4 - Type III secretion apparatus protein OrgA/MxiK
LHKJJB_10980 LHKJJB_10980 30.1 Morganella morganii S3 - Type III secretion apparatus protein OrgA/MxiK
HKOGLL_14040 HKOGLL_14040 30.1 Morganella morganii S5 - Type III secretion apparatus protein OrgA/MxiK
F4V73_RS10585 F4V73_RS10585 29.9 Morganella psychrotolerans - hypothetical protein

Distribution of the homologs in the orthogroup group_1516

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1516

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0CL44 0.000162 44 27 6 156 1 orgA Oxygen-regulated invasion protein OrgA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
E1WAB5 0.000162 44 27 6 156 1 orgA Oxygen-regulated invasion protein OrgA Salmonella typhimurium (strain SL1344)
D0ZV07 0.000162 44 27 6 156 3 orgA Oxygen-regulated invasion protein OrgA Salmonella typhimurium (strain 14028s / SGSC 2262)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS13315
Feature type CDS
Gene -
Product type III secretion protein
Location 2953170 - 2953742 (strand: 1)
Length 573 (nucleotides) / 190 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1516
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK)

Protein Sequence

MSNLTAEQFKLISNVMYEPLSYIHSDYDVLASPEENTLWQKIANRHLIGQYQLILHIDCEIDTTVEKIFTHWHTLPRCALFLGYFYSRHTLLAQNYYHLEPALKAFLALYPMLNRTVDSKILLSLKDIAPIDIGYQLLFNFIKLISNALAQRFKLLFSPKSLSINIEFPKSLVLSPTLFLLVLNYATLVT

Flanking regions ( +/- flanking 50bp)

CATATTGATTATTTATCGTCGTAAACAAGTCAATAAAATGGTAAGCGAGAATGAGTAATCTGACTGCTGAACAATTTAAATTGATCTCTAATGTAATGTATGAACCGTTAAGTTATATCCATTCAGACTACGATGTATTAGCATCGCCAGAAGAAAATACCCTATGGCAAAAAATAGCTAATCGTCATTTAATTGGGCAATATCAACTTATACTGCATATTGATTGTGAGATTGATACTACCGTAGAAAAAATATTTACTCATTGGCACACTCTTCCTCGTTGTGCTTTATTTTTAGGTTATTTTTATTCTCGTCATACGCTATTAGCACAAAATTATTATCATTTAGAACCTGCATTAAAAGCCTTTTTAGCTCTCTATCCTATGTTAAATAGGACTGTCGATAGCAAAATATTACTGTCACTAAAAGATATTGCCCCCATAGATATTGGCTATCAATTACTATTTAATTTTATTAAGCTAATATCGAACGCACTAGCTCAACGTTTTAAATTACTTTTTTCACCAAAATCTTTATCAATTAATATTGAATTTCCTAAATCACTTGTTTTATCTCCTACACTTTTTTTACTGGTATTAAATTATGCTACGCTTGTTACCTGACAACCTTTTAAAATATACCTGCGAAGGTGTATTAATACGAGCTCACTATA