PF07943


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07943, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07943
Description Penicillin-binding protein 5, C-terminal domain

Occurence in the database

PF07943 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_47 FBDBKF_06950 53751 54953 1 dacC D-alanyl-D-alanine carboxypeptidase Morganella morganii S1
1 group_47 FBDBKF_10095 111633 112847 1 dacA D-alanyl-D-alanine carboxypeptidase DacA Morganella morganii S1
2 group_47 EHELCC_04020 131233 132435 -1 dacC D-alanyl-D-alanine carboxypeptidase Morganella morganii S2
3 group_47 EHELCC_04895 303598 304812 1 dacA D-alanyl-D-alanine carboxypeptidase DacA Morganella morganii S2
4 group_47 NLDBIP_04020 131029 132231 -1 dacC D-alanyl-D-alanine carboxypeptidase Morganella morganii S4
5 group_47 NLDBIP_04895 303394 304608 1 dacA D-alanyl-D-alanine carboxypeptidase DacA Morganella morganii S4
6 group_47 LHKJJB_09850 131143 132345 -1 dacC D-alanyl-D-alanine carboxypeptidase Morganella morganii S3
7 group_47 LHKJJB_13735 30770 31984 -1 dacA D-alanyl-D-alanine carboxypeptidase DacA Morganella morganii S3
8 group_47 HKOGLL_09125 58707 59909 1 dacC D-alanyl-D-alanine carboxypeptidase Morganella morganii S5
9 group_47 HKOGLL_12800 112414 113628 1 dacA D-alanyl-D-alanine carboxypeptidase DacA Morganella morganii S5
10 group_47 F4V73_RS00240 58644 59858 -1 dacA D-alanyl-D-alanine carboxypeptidase DacA Morganella psychrotolerans
11 group_47 F4V73_RS01135 238780 239982 1 serine hydrolase Morganella psychrotolerans
12 group_47 PMI_RS02085 489929 491140 -1 dacA D-alanyl-D-alanine carboxypeptidase DacA Proteus mirabilis HI4320
13 group_47 PMI_RS03290 726267 727469 1 serine hydrolase Proteus mirabilis HI4320