Orthogroup:group_470



Homologs in group_470

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06950 FBDBKF_06950 Morganella morganii S1 dacC D-alanyl-D-alanine carboxypeptidase
EHELCC_04020 EHELCC_04020 Morganella morganii S2 dacC D-alanyl-D-alanine carboxypeptidase
NLDBIP_04020 NLDBIP_04020 Morganella morganii S4 dacC D-alanyl-D-alanine carboxypeptidase
LHKJJB_09850 LHKJJB_09850 Morganella morganii S3 dacC D-alanyl-D-alanine carboxypeptidase
HKOGLL_09125 HKOGLL_09125 Morganella morganii S5 dacC D-alanyl-D-alanine carboxypeptidase
F4V73_RS01135 F4V73_RS01135 Morganella psychrotolerans - serine hydrolase
PMI_RS03290 PMI_RS03290 Proteus mirabilis HI4320 - serine hydrolase

Distribution of group_470 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_470 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_470

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_470.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dacC 5
2 - 2

Product

# Product Occurence
1 D-alanyl-D-alanine carboxypeptidase 5
2 serine hydrolase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1686 7 M Cell wall/membrane/envelope biogenesis (M) D-alanyl-D-alanine carboxypeptidase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07258 7 serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Peptidoglycan biosynthesis
Metabolic pathways
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00768 7 D-alanyl-D-alanine carboxypeptidase
PF07943 7 Penicillin-binding protein 5, C-terminal domain

Annotations of the 18 SwissProt hits

Annotation Number of occurrences
D-alanyl-D-alanine carboxypeptidase 1
D-alanyl-D-alanine carboxypeptidase DacA 6
D-alanyl-D-alanine carboxypeptidase DacB 1
D-alanyl-D-alanine carboxypeptidase DacB1 1
D-alanyl-D-alanine carboxypeptidase DacB2 1
D-alanyl-D-alanine carboxypeptidase DacC 1
D-alanyl-D-alanine carboxypeptidase DacD 2
D-alanyl-D-alanine carboxypeptidase DacF 1
D-alanyl-D-alanine endopeptidase 4

Protein length

Unique protein length 400

Protein length distribution