PF06450


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF06450
Protein list: lists the 7 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF06450
Description Bacterial Na+/H+ antiporter B (NhaB)

Occurence in the database

PF06450 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1057 FBDBKF_05480 106610 108157 1 nhaB sodium/proton antiporter NhaB Morganella morganii S1
1 group_1057 EHELCC_12110 73337 74884 -1 nhaB sodium/proton antiporter NhaB Morganella morganii S2
2 group_1057 NLDBIP_12450 73292 74839 -1 nhaB sodium/proton antiporter NhaB Morganella morganii S4
3 group_1057 LHKJJB_12310 73337 74884 -1 nhaB sodium/proton antiporter NhaB Morganella morganii S3
4 group_1057 HKOGLL_10925 73337 74884 -1 nhaB sodium/proton antiporter NhaB Morganella morganii S5
5 group_1057 F4V73_RS03820 807514 809061 -1 nhaB sodium/proton antiporter NhaB Morganella psychrotolerans
6 group_1057 PMI_RS07325 1605160 1606704 1 nhaB sodium/proton antiporter NhaB Proteus mirabilis HI4320