PF05772


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF05772, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 11 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF05772
Description NinB protein

Occurence in the database

PF05772 is associated with 11 different proteins (see tab "Protein list" and "Profile")
The 11 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_108 FBDBKF_00215 33083 33526 -1 ninB Recombination protein NinB Morganella morganii S1
1 group_108 FBDBKF_11300 69443 69886 1 ninB NinB protein Morganella morganii S1
2 group_108 EHELCC_01330 275342 275785 1 ninB Recombination protein NinB Morganella morganii S2
3 group_108 EHELCC_17915 30829 31272 -1 ninB NinB protein Morganella morganii S2
4 group_108 NLDBIP_02130 404351 404794 -1 ninB Recombination protein NinB Morganella morganii S4
5 group_108 NLDBIP_05245 30655 31098 -1 ninB NinB protein Morganella morganii S4
6 group_108 LHKJJB_02125 8179 8622 -1 ninB NinB protein Morganella morganii S3
7 group_108 LHKJJB_03645 11592 12035 -1 ninB Recombination protein NinB Morganella morganii S3
8 group_108 HKOGLL_03400 275547 275990 1 ninB Recombination protein NinB Morganella morganii S5
9 group_108 HKOGLL_15505 31619 32062 -1 ninB NinB protein Morganella morganii S5
10 group_4043 F4V73_RS06205 1303240 1303683 -1 recombination protein NinB Morganella psychrotolerans