Homologs in group_4043

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4043

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4043

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q38662 5.58e-09 54 28 2 132 3 ninB Protein ninB Salmonella phage P22
P68651 8.9e-09 54 28 2 132 3 ninB P21 prophage-derived protein NinB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P68652 8.9e-09 54 28 2 132 3 ninB Protein ninB Enterobacteria phage P21
P03765 1.35e-08 53 28 2 132 1 ninB Protein ninB Escherichia phage lambda

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06205
Feature type CDS
Gene -
Product recombination protein NinB
Location 1303240 - 1303683 (strand: -1)
Length 444 (nucleotides) / 147 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4043
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF05772 NinB protein

Protein Sequence

MQKQTFLLRNARILSNLKAALDNLPLNDDFPLEVKISDSSRTLPQNDMFHALCGNVAEQRIVWAGNAWGLQDWKCIFVSGHAKATGRDGKLIPGLEGEIVPLARESTASMGKKRMTSLIEYSQAWAIGEGVKPRTTRYNFNYYGHQE

Flanking regions ( +/- flanking 50bp)

AGCCGGAGGCAATTTCAGCCTGGAACCGGAGAGCACCAACAGGGGGTTAAATGCAAAAACAGACATTCCTACTCAGGAATGCGCGAATACTCAGCAATCTCAAAGCAGCACTCGACAATCTTCCGCTCAACGACGATTTTCCCCTCGAAGTAAAAATCTCAGACTCATCCCGAACACTCCCGCAAAACGATATGTTCCACGCACTGTGTGGCAACGTCGCAGAGCAGCGCATCGTGTGGGCTGGTAATGCATGGGGATTGCAGGACTGGAAATGTATTTTTGTGTCCGGTCACGCGAAAGCCACAGGCAGAGACGGGAAACTTATTCCTGGACTGGAGGGCGAGATTGTACCGCTGGCAAGAGAGAGCACTGCAAGCATGGGTAAGAAGCGCATGACGAGCTTAATCGAGTACTCGCAGGCGTGGGCTATAGGTGAGGGAGTGAAGCCCCGCACAACGCGATACAACTTTAATTATTACGGACATCAGGAATAGGGAGCAGGAATCATGACCGAAAAAATGTACCTGAAACTTAATTTTATCAT