PF04324


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04324, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04324
Description BFD-like [2Fe-2S] binding domain

Occurence in the database

PF04324 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_777 FBDBKF_03595 123448 125094 -1 glpA anaerobic glycerol-3-phosphate dehydrogenase subunit A Morganella morganii S1
1 group_1270 FBDBKF_07505 13599 16139 -1 nirB NAD(P)H-nitrite reductase, large subunit Morganella morganii S1
2 group_2402 FBDBKF_19260 24370 24561 -1 bfd bacterioferritin-associated ferredoxin Morganella morganii S1
3 group_777 EHELCC_06940 122009 123655 1 glpA anaerobic glycerol-3-phosphate dehydrogenase subunit A Morganella morganii S2
4 group_1270 EHELCC_17175 41249 43789 -1 nirB NAD(P)H-nitrite reductase, large subunit Morganella morganii S2
5 group_2402 EHELCC_19005 24370 24561 -1 bfd bacterioferritin-associated ferredoxin Morganella morganii S2
6 group_777 NLDBIP_07265 121882 123528 1 glpA anaerobic glycerol-3-phosphate dehydrogenase subunit A Morganella morganii S4
7 group_1270 NLDBIP_13780 8668 11208 -1 nirB NAD(P)H-nitrite reductase, large subunit Morganella morganii S4
8 group_2402 NLDBIP_19020 24370 24561 -1 bfd bacterioferritin-associated ferredoxin Morganella morganii S4
9 group_777 LHKJJB_06800 85628 87274 1 glpA anaerobic glycerol-3-phosphate dehydrogenase subunit A Morganella morganii S3
10 group_1270 LHKJJB_09070 148541 151081 1 nirB NAD(P)H-nitrite reductase, large subunit Morganella morganii S3
11 group_2402 LHKJJB_18875 24370 24561 -1 bfd bacterioferritin-associated ferredoxin Morganella morganii S3
12 group_777 HKOGLL_04130 146113 147759 -1 glpA anaerobic glycerol-3-phosphate dehydrogenase subunit A Morganella morganii S5
13 group_1270 HKOGLL_08620 148541 151081 1 nirB NAD(P)H-nitrite reductase, large subunit Morganella morganii S5
14 group_2402 HKOGLL_18610 24370 24561 -1 bfd bacterioferritin-associated ferredoxin Morganella morganii S5
15 group_777 F4V73_RS11275 395836 397482 1 glpA anaerobic glycerol-3-phosphate dehydrogenase subunit A Morganella psychrotolerans
16 group_1270 F4V73_RS13605 354373 356913 1 nirB nitrite reductase large subunit NirB Morganella psychrotolerans
17 group_2402 F4V73_RS18905 5775 5966 1 bfd bacterioferritin-associated ferredoxin Morganella psychrotolerans
18 group_1270 PMI_RS07160 1564568 1567114 -1 nirB nitrite reductase large subunit NirB Proteus mirabilis HI4320
19 group_2402 PMI_RS16135 3581274 3581471 1 bfd bacterioferritin-associated ferredoxin Proteus mirabilis HI4320
20 group_777 PMI_RS17870 3925455 3927113 1 glpA anaerobic glycerol-3-phosphate dehydrogenase subunit A Proteus mirabilis HI4320