PF04219


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04219, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04219
Description Protein of unknown function, DUF

Occurence in the database

PF04219 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1317 FBDBKF_08150 2730 3068 1 yifE UPF0438 protein YifE Morganella morganii S1
1 group_1317 EHELCC_13380 160657 160995 -1 yifE UPF0438 protein YifE Morganella morganii S2
2 group_1317 NLDBIP_13715 160657 160995 -1 yifE UPF0438 protein YifE Morganella morganii S4
3 group_1317 LHKJJB_12840 1448 1786 1 yifE UPF0438 protein YifE Morganella morganii S3
4 group_1317 HKOGLL_12190 160657 160995 -1 yifE UPF0438 protein YifE Morganella morganii S5
5 group_1317 F4V73_RS18675 1697 2035 1 DUF413 domain-containing protein Morganella psychrotolerans
6 group_1317 PMI_RS16385 3613353 3613691 1 DUF413 domain-containing protein Proteus mirabilis HI4320