PF04217


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04217, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04217
Description Protein of unknown function, DUF412

Occurence in the database

PF04217 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1904 FBDBKF_14200 37262 37717 -1 yfbV terminus macrodomain insulation protein YfbV Morganella morganii S1
1 group_1904 EHELCC_08080 79268 79723 1 yfbV terminus macrodomain insulation protein YfbV Morganella morganii S2
2 group_1904 NLDBIP_08405 79268 79723 1 yfbV terminus macrodomain insulation protein YfbV Morganella morganii S4
3 group_1904 LHKJJB_05860 177436 177891 -1 yfbV terminus macrodomain insulation protein YfbV Morganella morganii S3
4 group_1904 HKOGLL_05055 63859 64314 1 yfbV terminus macrodomain insulation protein YfbV Morganella morganii S5
5 group_1904 F4V73_RS02730 576136 576591 1 yfbV terminus macrodomain insulation protein YfbV Morganella psychrotolerans
6 group_1904 PMI_RS08680 1896466 1896921 -1 yfbV terminus macrodomain insulation protein YfbV Proteus mirabilis HI4320