Orthogroup:group_1942


Homologs in group_1942

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14570 FBDBKF_14570 Morganella morganii S1 purB adenylosuccinate lyase
EHELCC_15375 EHELCC_15375 Morganella morganii S2 purB adenylosuccinate lyase
NLDBIP_15905 NLDBIP_15905 Morganella morganii S4 purB adenylosuccinate lyase
LHKJJB_15935 LHKJJB_15935 Morganella morganii S3 purB adenylosuccinate lyase
HKOGLL_15055 HKOGLL_15055 Morganella morganii S5 purB adenylosuccinate lyase
F4V73_RS07365 F4V73_RS07365 Morganella psychrotolerans purB adenylosuccinate lyase
PMI_RS04355 PMI_RS04355 Proteus mirabilis HI4320 purB adenylosuccinate lyase

Distribution of group_1942 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1942 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1942

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1942.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 purB 7

Product

# Product Occurence
1 adenylosuccinate lyase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0015 7 F Nucleotide transport and metabolism (F) Adenylosuccinate lyase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00206 7 Lyase
PF08328 7 Adenylosuccinate lyase C-terminal

Annotations of the 96 SwissProt hits

Annotation Number of occurrences
3-carboxy-cis,cis-muconate cycloisomerase 2
3-carboxy-cis,cis-muconate cycloisomerase (Fragment) 1
Adenylosuccinate lyase 45
Argininosuccinate lyase 1
Fumarate hydratase class II 36
Fumarate hydratase class II 2 1
Fumarate hydratase, mitochondrial 7
N-acetyl-S-(2-succino)cysteine lyase 2
Probable fumarate hydratase, mitochondrial 1

Protein length

Min length 455
Max length 456
Mean length (sd) 455.1 (0.4)
Median length 455.0

Protein length distribution