PF04143


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04143, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 27 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04143
Description Sulphur transport

Occurence in the database

PF04143 is associated with 27 different proteins (see tab "Protein list" and "Profile")
The 27 proteins are classified into 5 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2546 FBDBKF_02520 200671 201663 -1 Sulphur transport domain-containing protein Morganella morganii S1
1 group_882 FBDBKF_04535 103620 104030 -1 yedE Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains Morganella morganii S1
2 group_2721 FBDBKF_07410 166405 167445 1 Sulphur transport domain-containing protein Morganella morganii S1
3 group_2273 FBDBKF_17480 29268 30479 -1 yedE selenium metabolism membrane protein YedE/FdhT Morganella morganii S1
4 group_2546 EHELCC_02990 588491 589483 -1 Sulphur transport domain-containing protein Morganella morganii S2
5 group_2721 EHELCC_03560 18741 19781 -1 Sulphur transport domain-containing protein Morganella morganii S2
6 group_882 EHELCC_05825 163077 163487 -1 yedE Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains Morganella morganii S2
7 group_2273 EHELCC_17375 29268 30428 -1 yedE selenium metabolism membrane protein YedE/FdhT Morganella morganii S2
8 group_2546 NLDBIP_00470 90653 91645 1 Sulphur transport domain-containing protein Morganella morganii S4
9 group_2721 NLDBIP_03560 18537 19577 -1 Sulphur transport domain-containing protein Morganella morganii S4
10 group_882 NLDBIP_06145 204142 204552 -1 yedE Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains Morganella morganii S4
11 group_2273 NLDBIP_17820 12368 13528 1 yedE selenium metabolism membrane protein YedE/FdhT Morganella morganii S4
12 group_2546 LHKJJB_01565 301040 302032 -1 Sulphur transport domain-containing protein Morganella morganii S3
13 group_882 LHKJJB_03025 181666 182076 -1 yedE Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains Morganella morganii S3
14 group_2721 LHKJJB_09390 18651 19691 -1 Sulphur transport domain-containing protein Morganella morganii S3
15 group_2273 LHKJJB_17740 12366 13526 1 yedE selenium metabolism membrane protein YedE/FdhT Morganella morganii S3
16 group_2546 HKOGLL_01605 306551 307543 -1 Sulphur transport domain-containing protein Morganella morganii S5
17 group_882 HKOGLL_06500 103530 103940 -1 yedE Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains Morganella morganii S5
18 group_2721 HKOGLL_09585 171361 172401 1 Sulphur transport domain-containing protein Morganella morganii S5
19 group_2273 HKOGLL_17750 12366 13526 1 yedE selenium metabolism membrane protein YedE/FdhT Morganella morganii S5
20 group_2508 F4V73_RS04220 892019 893095 -1 yedE YedE family putative selenium transporter Morganella psychrotolerans
21 group_2546 F4V73_RS04890 1039547 1040539 -1 YeeE/YedE family protein Morganella psychrotolerans
22 group_2721 F4V73_RS06495 1351881 1352921 -1 YeeE/YedE family protein Morganella psychrotolerans
23 group_882 F4V73_RS08990 1878395 1878805 -1 YeeE/YedE thiosulfate transporter family protein Morganella psychrotolerans
24 group_2273 F4V73_RS16655 153285 154496 -1 yedE selenium metabolism membrane protein YedE/FdhT Morganella psychrotolerans
25 group_2273 PMI_RS00200 63205 64431 1 yedE selenium metabolism membrane protein YedE/FdhT Proteus mirabilis HI4320
26 group_882 PMI_RS10360 2277506 2277940 -1 YeeE/YedE thiosulfate transporter family protein Proteus mirabilis HI4320