Homologs in group_2273

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17480 FBDBKF_17480 80.9 Morganella morganii S1 yedE selenium metabolism membrane protein YedE/FdhT
EHELCC_17375 EHELCC_17375 81.1 Morganella morganii S2 yedE selenium metabolism membrane protein YedE/FdhT
NLDBIP_17820 NLDBIP_17820 81.1 Morganella morganii S4 yedE selenium metabolism membrane protein YedE/FdhT
LHKJJB_17740 LHKJJB_17740 81.1 Morganella morganii S3 yedE selenium metabolism membrane protein YedE/FdhT
HKOGLL_17750 HKOGLL_17750 81.1 Morganella morganii S5 yedE selenium metabolism membrane protein YedE/FdhT
F4V73_RS16655 F4V73_RS16655 80.4 Morganella psychrotolerans yedE selenium metabolism membrane protein YedE/FdhT

Distribution of the homologs in the orthogroup group_2273

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2273

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q06400 0.0 636 77 0 391 3 yedE Probable transporter YedE Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P31064 0.0 627 76 1 408 1 yedE Probable transporter YedE Escherichia coli (strain K12)
P33015 4.06e-14 76 43 1 96 1 tsuA Thiosulfate transporter TsuA Escherichia coli (strain K12)
G0GAP6 2.91e-10 64 37 2 107 1 tsuA Thiosulfate transporter TsuA Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00200
Feature type CDS
Gene yedE
Product selenium metabolism membrane protein YedE/FdhT
Location 63205 - 64431 (strand: 1)
Length 1227 (nucleotides) / 408 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2273
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04143 Sulphur transport

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3127 Secondary metabolites biosynthesis, transport and catabolism (Q) Q Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07112 uncharacterized protein - -

Protein Sequence

MSWSEFKSQYLIRFWKPLPAVIAAGILSTYYFGLTGTFWAVTGEFTRWGGHVMQWFGAHPEEWGYFKIIGLEGTPLTRIDGVMIIGMFGGCIMAALWANNVKLRHPQHKVRILQAVLGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAVATAIGSYFGAKLSLMPLFRIPVKLQKVSKASPITQDKQRAKRRFRLGMVIFFAMIAWSLIILFDSPKLGFAMLGGIGFGILIERAQICFTSAFRDLWITGRTHMAKAIIIGMAVSAVGIFSYVQLGAAPKIMWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQIHFWWVGLGNVIGSTILAYYWDDFSAVLATDYDKINLLDTFGPVGGLAITYLLLGLSFILLLWWEKHFFRKRAQQAQALSTQINKEIA

Flanking regions ( +/- flanking 50bp)

TCCTACTGCGTGGAGAGGGTCTCTCGTGGGGGTAAGTTCTAGGGAAAAACATGTCTTGGTCAGAATTTAAATCTCAATACCTGATCCGTTTCTGGAAGCCTCTTCCGGCGGTTATTGCAGCAGGTATCTTATCTACTTACTACTTTGGTTTAACCGGCACTTTCTGGGCAGTTACTGGTGAGTTTACTCGCTGGGGCGGTCATGTGATGCAATGGTTTGGTGCGCATCCAGAAGAATGGGGTTACTTTAAAATCATTGGTCTTGAAGGGACACCACTCACTCGTATTGATGGGGTAATGATTATTGGGATGTTTGGTGGTTGTATTATGGCAGCACTTTGGGCCAATAATGTCAAACTTCGTCATCCTCAGCATAAAGTGCGTATTCTTCAGGCCGTTTTGGGCGGTATTATTGCCGGATTTGGTGCACGTTTAGCTATGGGGTGTAACCTCGCGGCATTCTTTACCGGTATTCCTCAATTTTCATTGCATGCTTGGTTCTTTGCTGTTGCTACTGCTATTGGCTCTTATTTTGGTGCCAAACTTTCATTAATGCCACTATTTCGTATACCGGTAAAACTGCAAAAAGTCAGTAAAGCATCACCTATTACGCAAGATAAACAACGTGCAAAACGTCGCTTTCGATTGGGGATGGTTATCTTTTTTGCCATGATCGCATGGTCATTAATTATTCTATTTGATTCACCCAAACTCGGCTTTGCTATGCTGGGGGGAATTGGCTTTGGGATCTTAATTGAACGTGCGCAAATCTGTTTTACTTCCGCATTTCGTGACTTATGGATAACCGGTAGAACGCATATGGCGAAAGCGATTATTATCGGTATGGCAGTAAGTGCGGTGGGTATTTTTAGCTATGTACAATTAGGTGCTGCACCGAAAATTATGTGGGCCGGTCCTAATGCAGTTATTGGTGGTTTGTTGTTTGGTTTTGGTATCGTGCTTGCTGGTGGTTGTGAAACAGGCTGGATGTATCGTGCAGTTGAAGGGCAGATCCACTTTTGGTGGGTAGGTTTAGGTAACGTGATTGGTTCAACAATACTGGCGTACTATTGGGATGATTTTTCTGCGGTACTGGCTACCGACTACGATAAAATCAACCTATTAGATACCTTTGGTCCAGTTGGTGGATTAGCCATCACCTACCTGCTACTTGGTCTCTCTTTTATATTACTACTTTGGTGGGAAAAACATTTCTTCCGCAAAAGAGCGCAACAAGCGCAAGCGCTTTCAACACAAATTAATAAGGAAATCGCATGAACGAGAAAAAAACCATAGTGCCAGATTATCGTCTTGATATGGTCGGTGAG