PF03796


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03796, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03796
Description DnaB-like helicase C terminal domain

Occurence in the database

PF03796 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_14 FBDBKF_12870 78868 80238 -1 DNA helicase Morganella morganii S1
1 group_14 FBDBKF_17050 42173 43579 -1 dnaB replicative DNA helicase Morganella morganii S1
2 group_14 FBDBKF_19710 5152 6504 1 dnaB-PI SPI-7-type island replicative DNA helicase Morganella morganii S1
3 group_14 FBDBKF_19795 4572 5924 1 dnaB-PI SPI-7-type island replicative DNA helicase Morganella morganii S1
4 group_14 EHELCC_10520 151266 152618 1 dnaB-PI SPI-7-type island replicative DNA helicase Morganella morganii S2
5 group_14 EHELCC_10805 198921 200273 1 dnaB-PI SPI-7-type island replicative DNA helicase Morganella morganii S2
6 group_14 EHELCC_16540 24931 26337 1 dnaB replicative DNA helicase Morganella morganii S2
7 group_14 NLDBIP_10865 129537 130889 1 dnaB-PI SPI-7-type island replicative DNA helicase Morganella morganii S4
8 group_14 NLDBIP_11150 177192 178544 1 dnaB-PI SPI-7-type island replicative DNA helicase Morganella morganii S4
9 group_14 NLDBIP_16750 24931 26337 1 dnaB replicative DNA helicase Morganella morganii S4
10 group_14 LHKJJB_10205 12984 14336 -1 dnaB-PI SPI-7-type island replicative DNA helicase Morganella morganii S3
11 group_14 LHKJJB_10490 60639 61991 -1 dnaB-PI SPI-7-type island replicative DNA helicase Morganella morganii S3
12 group_14 LHKJJB_16720 42173 43579 -1 dnaB replicative DNA helicase Morganella morganii S3
13 group_14 HKOGLL_16370 12993 14345 -1 dnaB-PI SPI-7-type island replicative DNA helicase Morganella morganii S5
14 group_14 HKOGLL_16655 60648 62000 -1 dnaB-PI SPI-7-type island replicative DNA helicase Morganella morganii S5
15 group_14 HKOGLL_17685 42173 43579 -1 dnaB replicative DNA helicase Morganella morganii S5
16 group_4235 F4V73_RS18080 60586 61935 -1 DnaB-like helicase C-terminal domain-containing protein Morganella psychrotolerans
17 group_14 F4V73_RS18530 43092 44498 -1 dnaB replicative DNA helicase Morganella psychrotolerans
18 group_14 PMI_RS02400 539122 540507 1 DnaB-like helicase C-terminal domain-containing protein Proteus mirabilis HI4320
19 group_14 PMI_RS13005 2883279 2884631 -1 dnaB-PI SPI-7-type island replicative DNA helicase Proteus mirabilis HI4320
20 group_14 PMI_RS13510 2993864 2995273 1 dnaB replicative DNA helicase Proteus mirabilis HI4320