Orthogroup:group_3732


Homologs in group_3732

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3 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
F4V73_RS12485 F4V73_RS12485 Morganella psychrotolerans - hemagglutinin repeat-containing protein
F4V73_RS12490 F4V73_RS12490 Morganella psychrotolerans - hypothetical protein
F4V73_RS12495 F4V73_RS12495 Morganella psychrotolerans - hemagglutinin repeat-containing protein

Distribution of group_3732 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3732 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3732

Orthogroup content: 3 members

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This page summarizes the annotation of all members of the orthologous group group_3732.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 3

Product

# Product Occurence
1 hemagglutinin repeat-containing protein 2
2 hypothetical protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3210 1 U Intracellular trafficking, secretion, and vesicular transport (U) Large exoprotein involved in heme utilization or adhesion

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K15125 2 filamentous hemagglutinin Pertussis -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04829 2 Pre-toxin domain with VENN motif
PF05860 1 TPS secretion domain
PF13018 1 Extended Signal Peptide of Type V secretion system
PF13332 2 Hemagglutinin repeat

Annotations of the 18 SwissProt hits

Annotation Number of occurrences
16S rRNA endonuclease CdiA 1
Deoxyribonuclease CdiA 2
Deoxyribonuclease CdiA-o11 1
Filamentous hemagglutinin 1
Hemolysin 2
Protein adenylyltransferase and cysteine protease IbpA 1
Toxin CdiA 2
tRNA nuclease CdiA 5
tRNA nuclease CdiA (Fragment) 2
tRNA nuclease CdiA-2 1

Protein length

Min length 108
Max length 2594
Mean length (sd) 1285.7 (1248.1)
Median length 1155.0

Protein length distribution