Homologs in group_14

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19 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12870 FBDBKF_12870 35.0 Morganella morganii S1 - DNA helicase
FBDBKF_17050 FBDBKF_17050 100.0 Morganella morganii S1 dnaB replicative DNA helicase
FBDBKF_19710 FBDBKF_19710 53.0 Morganella morganii S1 dnaB-PI SPI-7-type island replicative DNA helicase
FBDBKF_19795 FBDBKF_19795 52.0 Morganella morganii S1 dnaB-PI SPI-7-type island replicative DNA helicase
EHELCC_10520 EHELCC_10520 52.0 Morganella morganii S2 dnaB-PI SPI-7-type island replicative DNA helicase
EHELCC_10805 EHELCC_10805 53.0 Morganella morganii S2 dnaB-PI SPI-7-type island replicative DNA helicase
EHELCC_16540 EHELCC_16540 100.0 Morganella morganii S2 dnaB replicative DNA helicase
NLDBIP_10865 NLDBIP_10865 52.0 Morganella morganii S4 dnaB-PI SPI-7-type island replicative DNA helicase
NLDBIP_11150 NLDBIP_11150 53.0 Morganella morganii S4 dnaB-PI SPI-7-type island replicative DNA helicase
NLDBIP_16750 NLDBIP_16750 100.0 Morganella morganii S4 dnaB replicative DNA helicase
LHKJJB_10205 LHKJJB_10205 53.0 Morganella morganii S3 dnaB-PI SPI-7-type island replicative DNA helicase
LHKJJB_10490 LHKJJB_10490 52.0 Morganella morganii S3 dnaB-PI SPI-7-type island replicative DNA helicase
HKOGLL_16370 HKOGLL_16370 53.0 Morganella morganii S5 dnaB-PI SPI-7-type island replicative DNA helicase
HKOGLL_16655 HKOGLL_16655 52.0 Morganella morganii S5 dnaB-PI SPI-7-type island replicative DNA helicase
HKOGLL_17685 HKOGLL_17685 100.0 Morganella morganii S5 dnaB replicative DNA helicase
F4V73_RS18530 F4V73_RS18530 95.9 Morganella psychrotolerans dnaB replicative DNA helicase
PMI_RS02400 PMI_RS02400 35.5 Proteus mirabilis HI4320 - DnaB-like helicase C-terminal domain-containing protein
PMI_RS13005 PMI_RS13005 53.0 Proteus mirabilis HI4320 dnaB-PI SPI-7-type island replicative DNA helicase
PMI_RS13510 PMI_RS13510 92.3 Proteus mirabilis HI4320 dnaB replicative DNA helicase

Distribution of the homologs in the orthogroup group_14

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_14

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A1Q4 0.0 825 86 0 457 3 dnaB Replicative DNA helicase DnaB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1Q5 0.0 825 86 0 457 3 dnaB Replicative DNA helicase DnaB Salmonella typhi
Q8FB22 0.0 803 83 0 465 3 dnaB Replicative DNA helicase DnaB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACB1 0.0 802 83 0 465 3 dnaB Replicative DNA helicase DnaB Shigella flexneri
P0ACB0 0.0 802 83 0 465 1 dnaB Replicative DNA helicase DnaB Escherichia coli (strain K12)
Q8X5V3 0.0 801 82 0 465 3 dnaB Replicative DNA helicase DnaB Escherichia coli O157:H7
Q8K932 0.0 758 77 0 463 3 dnaB Replicative DNA helicase DnaB Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57611 0.0 758 79 0 456 3 dnaB Replicative DNA helicase DnaB Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89A52 0.0 671 69 0 457 3 dnaB Replicative DNA helicase DnaB Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P45256 0.0 649 68 3 463 3 dnaB Replicative DNA helicase DnaB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9CNL6 0.0 637 69 2 441 3 dnaB Replicative DNA helicase DnaB Pasteurella multocida (strain Pm70)
Q9X4C9 1.16e-128 383 45 8 444 1 dnaB Replicative DNA helicase DnaB Geobacillus stearothermophilus
P37469 2.46e-126 377 44 6 439 1 dnaC Replicative DNA helicase DnaC Bacillus subtilis (strain 168)
Q6ABX1 1.57e-110 337 41 6 438 3 dnaB Replicative DNA helicase DnaB Leifsonia xyli subsp. xyli (strain CTCB07)
P49519 1.31e-102 317 37 6 445 3 dnaB Probable replicative DNA helicase Trieres chinensis
Q68WJ2 1e-97 305 36 9 474 3 dnaB Replicative DNA helicase DnaB Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q92HG8 1.1e-96 303 36 10 498 3 dnaB Replicative DNA helicase DnaB Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q9ZD08 3.17e-96 301 36 10 480 3 dnaB Replicative DNA helicase DnaB Rickettsia prowazekii (strain Madrid E)
Q4UL62 8.48e-94 295 36 7 472 3 dnaB Replicative DNA helicase DnaB Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q1RI04 1.19e-93 295 36 7 470 3 dnaB Replicative DNA helicase DnaB Rickettsia bellii (strain RML369-C)
Q8YZA1 6.33e-86 285 42 7 391 3 dnaB Replicative DNA helicase DnaB Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Q8YZA1 2.07e-13 76 50 0 62 3 dnaB Replicative DNA helicase DnaB Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
O83097 1.06e-84 270 36 8 436 1 dnaB Replicative DNA helicase DnaB Treponema pallidum (strain Nichols)
Q55418 6.71e-83 276 38 6 388 1 dnaB Replicative DNA helicase DnaB Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q55418 1.09e-12 73 53 0 65 1 dnaB Replicative DNA helicase DnaB Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P9WMR3 4.06e-82 274 37 5 383 1 dnaB Replicative DNA helicase DnaB Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMR3 4.12e-05 50 36 0 58 1 dnaB Replicative DNA helicase DnaB Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMR2 4.19e-82 274 37 5 383 3 dnaB Replicative DNA helicase DnaB Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P9WMR2 4.19e-05 50 36 0 58 3 dnaB Replicative DNA helicase DnaB Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P59966 4.19e-82 274 37 5 383 3 dnaB Replicative DNA helicase DnaB Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P59966 4.19e-05 50 36 0 58 3 dnaB Replicative DNA helicase DnaB Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
O30477 7.4e-79 266 41 13 405 3 dnaB Replicative DNA helicase DnaB Rhodothermus marinus
O30477 8.2e-15 80 55 2 72 3 dnaB Replicative DNA helicase DnaB Rhodothermus marinus
Q9ZJM5 4.23e-74 244 31 7 485 3 dnaB Replicative DNA helicase DnaB Helicobacter pylori (strain J99 / ATCC 700824)
O25916 2.48e-72 239 31 7 485 1 dnaB Replicative DNA helicase DnaB Helicobacter pylori (strain ATCC 700392 / 26695)
P03006 3.22e-66 223 35 12 443 3 12 Replicative DNA helicase Salmonella phage P22
Q46259 1.29e-62 213 31 7 448 3 None Probable plasmid replicative DNA helicase Chlamydia psittaci
P51333 6.53e-56 198 32 6 368 3 dnaB Probable replicative DNA helicase Porphyra purpurea
P51333 7.64e-10 64 45 0 57 3 dnaB Probable replicative DNA helicase Porphyra purpurea
P47340 3.09e-54 191 32 13 466 3 dnaB Replicative DNA helicase DnaB Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
O78411 3.43e-54 194 30 4 395 3 dnaB Probable replicative DNA helicase Guillardia theta
O78411 3.89e-07 56 44 1 59 3 dnaB Probable replicative DNA helicase Guillardia theta
Q9F5P4 1.54e-53 192 42 2 227 3 dnaB Replicative DNA helicaseDnab (Fragment) Mycobacterium intracellulare
Q1XDF3 3.52e-49 179 44 4 210 3 dnaB Probable replicative DNA helicase Neopyropia yezoensis
Q1XDF3 9.49e-10 64 47 0 55 3 dnaB Probable replicative DNA helicase Neopyropia yezoensis
P46394 1.68e-47 176 41 2 227 3 dnaB Replicative DNA helicase DnaB Mycobacterium leprae (strain TN)
P46394 1.61e-32 134 33 4 213 3 dnaB Replicative DNA helicase DnaB Mycobacterium leprae (strain TN)
P0CE16 3e-47 172 38 4 252 3 None Probable plasmid replicative DNA helicase Chlamydia trachomatis
B0BCM3 3e-47 172 38 4 252 3 pL2-03 Probable plasmid replicative DNA helicase Chlamydia trachomatis serovar L2 (strain ATCC VR-902B / DSM 19102 / 434/Bu)
P75539 5.98e-44 164 33 10 362 3 dnaB Replicative DNA helicase DnaB Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
Q46437 8.12e-42 157 36 5 272 3 TC_A03 Probable plasmid replicative DNA helicase Chlamydia muridarum (strain MoPn / Nigg)
P03692 9.51e-05 48 26 11 250 1 4 DNA helicase/primase Escherichia phage T7

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_16720
Feature type CDS
Gene dnaB
Product replicative DNA helicase
Location 42173 - 43579 (strand: -1)
Length 1407 (nucleotides) / 468 (amino acids)

Contig

Accession ZDB_376
Length 68509 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_14
Orthogroup size 20
N. genomes 7

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Genomic region

Domains

PF00772 DnaB-like helicase N terminal domain
PF03796 DnaB-like helicase C terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0305 Replication, recombination and repair (L) L Replicative DNA helicase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02314 replicative DNA helicase [EC:5.6.2.3] DNA replication
Cell cycle - Caulobacter		 -

Protein Sequence

MARYPKDTKTDKPRDHQMEGLKLPPHSLEAEQSVLGGLMLDNERWDNVSERVTGEDFFSRPHRTIFSQMQRLLEQGRPIDLITLSEALETGGELENVGGFAYLAELSKNTPSAANINAYADIVRERAVIRDMISVANEIADAGYDPQGRSSEDLLDLAESRVFQIAENRANKDEGPKGIEAILEETVEKIEKLYAQPHDGVTGVSSGYQDLDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAAMTEEKPVLIFSLEMPGNQIMMRMLASLSRVDQTRIRTGQLDDEDWARISSTMGILLEKRNMYIDDSSGLTPTEVRSRARRIFREHGGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRSEKRPVNSDLRESGSIEQDADLIMFIYRDEVYNENSDLKGVAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYSGPSYDDE

Flanking regions ( +/- flanking 50bp)

GGGACGCAGGTATTCTCCCCGGCAGACGCACTGATAAGTAAGAGAGTTTCATGGCCAGATATCCCAAGGACACCAAGACCGACAAACCCCGTGACCATCAGATGGAAGGGCTGAAATTACCGCCGCATTCCCTGGAAGCCGAGCAGTCCGTTCTCGGCGGACTGATGCTGGACAACGAGCGTTGGGATAATGTCTCTGAACGTGTGACCGGCGAGGACTTTTTCAGCCGCCCGCACCGGACGATTTTCAGTCAGATGCAGCGCCTGCTCGAGCAGGGACGACCGATTGACCTGATCACCCTGTCTGAAGCACTGGAAACCGGCGGCGAGCTGGAAAATGTCGGTGGTTTTGCCTATCTGGCAGAACTTTCGAAAAATACGCCAAGTGCGGCGAACATTAACGCTTATGCTGATATCGTCCGCGAACGTGCGGTGATCCGCGATATGATTTCTGTCGCCAATGAGATCGCCGATGCCGGTTACGATCCGCAGGGGCGTTCCAGTGAGGATCTGCTCGATCTGGCGGAATCCCGCGTGTTCCAGATCGCCGAAAACCGTGCCAATAAAGATGAAGGTCCGAAGGGGATCGAGGCGATTCTGGAAGAAACCGTTGAGAAGATCGAAAAACTTTATGCCCAGCCGCATGACGGCGTGACCGGGGTATCGTCCGGGTATCAGGATCTGGATAAAAAGACCGCCGGTCTGCAACCGTCTGATTTAATTATTGTTGCGGCGCGTCCGTCCATGGGGAAAACCACCTTCGCCATGAACCTGTGTGAAAACGCCGCTATGACCGAAGAAAAACCGGTTCTGATTTTCAGCCTCGAGATGCCCGGCAACCAGATCATGATGCGTATGCTGGCTTCCCTTTCCCGCGTTGACCAGACCCGTATCCGTACCGGGCAGCTCGATGATGAGGACTGGGCGCGCATCTCCAGCACCATGGGTATTCTGCTGGAAAAGCGCAACATGTATATTGATGACTCTTCCGGCCTGACCCCGACCGAAGTCCGCTCCCGCGCACGGCGGATTTTCCGTGAGCACGGCGGCTTAAGCTTGATTATGATCGATTACCTGCAATTAATGCGCGTACCGTCCCTCTCCGATAACCGTACCCTGGAAATTGCTGAGATTTCCCGTTCCCTGAAAGCACTAGCCAAAGAATTACAGGTGCCGGTGGTTGCGCTGTCCCAGCTGAACCGTAGTCTGGAACAACGTTCTGAAAAACGCCCGGTAAACTCCGACCTGCGTGAATCCGGCTCTATCGAGCAGGATGCCGACCTTATCATGTTTATCTATCGTGACGAGGTGTATAACGAAAACAGTGATCTGAAAGGCGTGGCTGAAATTATTATTGGTAAGCAGCGTAACGGCCCTATCGGAACCGTCCGTCTGACCTTCAACGGCCAGTGGTCACGTTTTGATAACTATTCAGGGCCGAGTTATGACGATGAATAAACCGTCTGAATATAATACGGACGGAATAATAACCCTGATAACAAACAAGA