Homologs in group_14

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19 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12870 FBDBKF_12870 33.3 Morganella morganii S1 - DNA helicase
FBDBKF_17050 FBDBKF_17050 53.0 Morganella morganii S1 dnaB replicative DNA helicase
FBDBKF_19710 FBDBKF_19710 100.0 Morganella morganii S1 dnaB-PI SPI-7-type island replicative DNA helicase
FBDBKF_19795 FBDBKF_19795 54.9 Morganella morganii S1 dnaB-PI SPI-7-type island replicative DNA helicase
EHELCC_10520 EHELCC_10520 54.9 Morganella morganii S2 dnaB-PI SPI-7-type island replicative DNA helicase
EHELCC_10805 EHELCC_10805 100.0 Morganella morganii S2 dnaB-PI SPI-7-type island replicative DNA helicase
EHELCC_16540 EHELCC_16540 53.0 Morganella morganii S2 dnaB replicative DNA helicase
NLDBIP_10865 NLDBIP_10865 54.9 Morganella morganii S4 dnaB-PI SPI-7-type island replicative DNA helicase
NLDBIP_11150 NLDBIP_11150 100.0 Morganella morganii S4 dnaB-PI SPI-7-type island replicative DNA helicase
NLDBIP_16750 NLDBIP_16750 53.0 Morganella morganii S4 dnaB replicative DNA helicase
LHKJJB_10205 LHKJJB_10205 100.0 Morganella morganii S3 dnaB-PI SPI-7-type island replicative DNA helicase
LHKJJB_10490 LHKJJB_10490 54.9 Morganella morganii S3 dnaB-PI SPI-7-type island replicative DNA helicase
LHKJJB_16720 LHKJJB_16720 53.0 Morganella morganii S3 dnaB replicative DNA helicase
HKOGLL_16370 HKOGLL_16370 100.0 Morganella morganii S5 dnaB-PI SPI-7-type island replicative DNA helicase
HKOGLL_16655 HKOGLL_16655 54.9 Morganella morganii S5 dnaB-PI SPI-7-type island replicative DNA helicase
HKOGLL_17685 HKOGLL_17685 53.0 Morganella morganii S5 dnaB replicative DNA helicase
F4V73_RS18530 F4V73_RS18530 52.1 Morganella psychrotolerans dnaB replicative DNA helicase
PMI_RS02400 PMI_RS02400 36.7 Proteus mirabilis HI4320 - DnaB-like helicase C-terminal domain-containing protein
PMI_RS13510 PMI_RS13510 53.5 Proteus mirabilis HI4320 dnaB replicative DNA helicase

Distribution of the homologs in the orthogroup group_14

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_14

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8X5V3 2.31e-159 461 54 6 441 3 dnaB Replicative DNA helicase DnaB Escherichia coli O157:H7
P0ACB1 2.87e-159 461 54 6 441 3 dnaB Replicative DNA helicase DnaB Shigella flexneri
P0ACB0 2.87e-159 461 54 6 441 1 dnaB Replicative DNA helicase DnaB Escherichia coli (strain K12)
Q8FB22 3.69e-159 461 54 6 441 3 dnaB Replicative DNA helicase DnaB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A1Q4 2.33e-158 459 54 6 441 3 dnaB Replicative DNA helicase DnaB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1Q5 2.33e-158 459 54 6 441 3 dnaB Replicative DNA helicase DnaB Salmonella typhi
P57611 2.51e-150 438 51 5 441 3 dnaB Replicative DNA helicase DnaB Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8K932 3.03e-150 438 50 6 450 3 dnaB Replicative DNA helicase DnaB Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P45256 3.64e-149 435 49 7 452 3 dnaB Replicative DNA helicase DnaB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9CNL6 6.66e-145 424 51 5 440 3 dnaB Replicative DNA helicase DnaB Pasteurella multocida (strain Pm70)
Q89A52 7.77e-141 414 48 7 449 3 dnaB Replicative DNA helicase DnaB Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q9X4C9 1.43e-108 331 42 4 436 1 dnaB Replicative DNA helicase DnaB Geobacillus stearothermophilus
P37469 2.71e-107 328 40 4 434 1 dnaC Replicative DNA helicase DnaC Bacillus subtilis (strain 168)
Q6ABX1 2.81e-99 307 40 6 429 3 dnaB Replicative DNA helicase DnaB Leifsonia xyli subsp. xyli (strain CTCB07)
P49519 2.36e-93 292 35 3 431 3 dnaB Probable replicative DNA helicase Trieres chinensis
Q92HG8 1.44e-83 268 35 11 468 3 dnaB Replicative DNA helicase DnaB Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q68WJ2 2.04e-82 265 34 13 473 3 dnaB Replicative DNA helicase DnaB Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q9ZD08 2.19e-82 265 35 13 473 3 dnaB Replicative DNA helicase DnaB Rickettsia prowazekii (strain Madrid E)
Q4UL62 2.62e-80 259 34 13 473 3 dnaB Replicative DNA helicase DnaB Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q1RI04 2.21e-79 257 34 12 479 3 dnaB Replicative DNA helicase DnaB Rickettsia bellii (strain RML369-C)
Q8YZA1 1.71e-74 253 39 3 381 3 dnaB Replicative DNA helicase DnaB Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Q8YZA1 1.24e-13 77 48 0 62 3 dnaB Replicative DNA helicase DnaB Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
O83097 3.09e-72 237 35 7 428 1 dnaB Replicative DNA helicase DnaB Treponema pallidum (strain Nichols)
Q9ZJM5 2.04e-71 236 32 7 465 3 dnaB Replicative DNA helicase DnaB Helicobacter pylori (strain J99 / ATCC 700824)
P9WMR3 7.98e-70 240 39 5 375 1 dnaB Replicative DNA helicase DnaB Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMR3 3.27e-05 50 38 0 57 1 dnaB Replicative DNA helicase DnaB Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMR2 9.39e-70 240 39 5 375 3 dnaB Replicative DNA helicase DnaB Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P9WMR2 3.41e-05 50 38 0 57 3 dnaB Replicative DNA helicase DnaB Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P59966 9.39e-70 240 39 5 375 3 dnaB Replicative DNA helicase DnaB Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P59966 3.41e-05 50 38 0 57 3 dnaB Replicative DNA helicase DnaB Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
O25916 1.99e-68 228 32 8 470 1 dnaB Replicative DNA helicase DnaB Helicobacter pylori (strain ATCC 700392 / 26695)
Q55418 1.12e-65 229 35 6 381 1 dnaB Replicative DNA helicase DnaB Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q55418 1.62e-11 70 50 0 61 1 dnaB Replicative DNA helicase DnaB Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O30477 6.25e-62 219 38 10 394 3 dnaB Replicative DNA helicase DnaB Rhodothermus marinus
O30477 1.4e-11 70 48 1 68 3 dnaB Replicative DNA helicase DnaB Rhodothermus marinus
P03006 9.65e-57 197 37 9 356 3 12 Replicative DNA helicase Salmonella phage P22
Q46259 6.83e-55 192 41 5 262 3 None Probable plasmid replicative DNA helicase Chlamydia psittaci
P51333 6.78e-50 181 29 7 396 3 dnaB Probable replicative DNA helicase Porphyra purpurea
P51333 1.94e-07 57 41 0 55 3 dnaB Probable replicative DNA helicase Porphyra purpurea
Q1XDF3 9.88e-50 181 33 4 320 3 dnaB Probable replicative DNA helicase Neopyropia yezoensis
Q1XDF3 8.12e-10 64 43 0 57 3 dnaB Probable replicative DNA helicase Neopyropia yezoensis
Q9F5P4 5.44e-47 173 46 3 209 3 dnaB Replicative DNA helicaseDnab (Fragment) Mycobacterium intracellulare
Q46437 2.87e-46 169 35 5 332 3 TC_A03 Probable plasmid replicative DNA helicase Chlamydia muridarum (strain MoPn / Nigg)
P0CE16 1.87e-45 167 38 2 254 3 None Probable plasmid replicative DNA helicase Chlamydia trachomatis
B0BCM3 1.87e-45 167 38 2 254 3 pL2-03 Probable plasmid replicative DNA helicase Chlamydia trachomatis serovar L2 (strain ATCC VR-902B / DSM 19102 / 434/Bu)
O78411 1.2e-43 164 27 4 396 3 dnaB Probable replicative DNA helicase Guillardia theta
O78411 3.62e-06 53 44 2 52 3 dnaB Probable replicative DNA helicase Guillardia theta
P46394 6.31e-43 162 47 3 208 3 dnaB Replicative DNA helicase DnaB Mycobacterium leprae (strain TN)
P46394 5.96e-28 120 36 3 208 3 dnaB Replicative DNA helicase DnaB Mycobacterium leprae (strain TN)
P47340 7.03e-41 155 37 8 281 3 dnaB Replicative DNA helicase DnaB Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
P75539 7.62e-39 149 35 9 286 3 dnaB Replicative DNA helicase DnaB Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P20315 1.74e-07 57 25 8 245 3 4 DNA helicase/primase Enterobacteria phage T3
P04530 2.18e-05 50 25 8 215 1 41 DnaB-like replicative helicase Enterobacteria phage T4
Q05279 0.000171 47 25 7 231 4 65 Gene 65 protein Mycobacterium phage L5

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS13005
Feature type CDS
Gene dnaB-PI
Product SPI-7-type island replicative DNA helicase
Location 2883279 - 2884631 (strand: -1)
Length 1353 (nucleotides) / 450 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_14
Orthogroup size 20
N. genomes 7

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Genomic region

Domains

PF00772 DnaB-like helicase N terminal domain
PF03796 DnaB-like helicase C terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0305 Replication, recombination and repair (L) L Replicative DNA helicase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02314 replicative DNA helicase [EC:5.6.2.3] DNA replication
Cell cycle - Caulobacter		 -

Protein Sequence

MHKKSSSAVLPETLYSPEAEQSVLGGLMLDNDRWDEVAPLLQAEDFCSRAHQEIWKKMAALCQINSPIDLITLSDVLEKDGVLERVGGFAYLAELSKNTPSAANIVRYAEIVVDRSRARGLMMLGNLLATQSVAAQANIPALCEQAEQRLFQLSEKGLPAYSPSLLDILNNVVQHLEEALSAKGITGTPTGFSELDEKTCGLQAGDLVLLGARPSMGKTALALTVAQNALRLAEKPVFFFSLEMPAEQIMQRLLSDLGNVSLTAIRSASLEENDWECLGGAMSQIAEWGERLVIDDTSNMTPSLLRARARRYRRKVGTPGLIIVDYLQLMRSPEQENRTQEISEISRSLKALAKELGCPVVALSQLNRQLEQRADKRPTNGDLRDSGSLEQDADLILFLYRDEVYHEHSPDKGVAEIIIGKQRQGPLGTVKVQFNGMYTRFSDFPQGYYF

Flanking regions ( +/- flanking 50bp)

TTATTTACACGGTGGGAACAGGGCATTTCGGATTAACGGAGGGCTTTTCAATGCATAAAAAGTCTTCTTCTGCTGTATTACCTGAAACTCTGTACTCACCGGAGGCGGAGCAGAGCGTGCTGGGCGGGCTGATGCTGGATAATGACCGCTGGGATGAAGTGGCGCCGTTATTACAGGCGGAGGATTTTTGTTCCAGAGCGCATCAGGAAATCTGGAAGAAAATGGCCGCCCTGTGTCAGATAAACAGCCCGATAGATTTAATCACCCTCAGTGATGTACTGGAAAAAGACGGCGTGCTTGAGCGGGTGGGGGGCTTTGCTTATCTGGCGGAATTATCCAAAAACACCCCCAGTGCGGCCAATATTGTCCGCTATGCGGAGATTGTCGTGGATCGCAGCCGTGCCCGTGGTCTGATGATGCTCGGGAATCTGCTGGCCACCCAGAGTGTGGCGGCTCAGGCAAATATACCGGCGTTATGTGAGCAGGCTGAACAGCGGCTGTTTCAGCTGTCAGAAAAAGGGCTGCCCGCTTATTCCCCGTCGTTGCTCGATATTTTAAATAATGTTGTTCAGCATCTGGAGGAGGCATTAAGTGCAAAAGGGATAACCGGTACGCCAACGGGGTTCAGTGAGCTGGATGAAAAAACCTGTGGTTTGCAGGCAGGCGATTTGGTGTTACTGGGCGCACGGCCATCGATGGGGAAAACGGCACTGGCGCTGACCGTTGCACAGAATGCCCTGCGTCTGGCAGAAAAACCGGTCTTTTTTTTCAGTCTGGAAATGCCGGCGGAACAAATCATGCAGCGCTTACTCAGTGATTTGGGCAATGTCTCACTGACGGCTATCCGCAGTGCGTCTCTGGAAGAAAATGACTGGGAGTGTCTTGGTGGTGCCATGTCACAGATTGCCGAATGGGGGGAGCGTCTGGTGATTGATGATACCAGTAATATGACACCTTCCCTGTTACGTGCCCGGGCACGGCGTTACCGCCGTAAAGTGGGTACGCCGGGACTGATTATTGTGGATTACCTTCAACTGATGCGCAGTCCTGAACAGGAAAACCGGACGCAGGAAATCAGTGAAATTTCCCGTAGTCTGAAAGCACTGGCGAAAGAACTCGGGTGTCCGGTGGTGGCCCTTTCCCAGCTAAACCGGCAACTGGAGCAACGTGCAGATAAGCGCCCGACAAACGGGGATTTACGGGATTCCGGCTCGCTGGAACAGGATGCGGATTTGATTTTATTTTTGTACCGCGATGAGGTGTATCACGAACACTCACCGGACAAAGGTGTGGCAGAAATTATCATCGGTAAGCAACGACAGGGACCGCTGGGGACGGTGAAAGTGCAGTTTAACGGGATGTATACCCGGTTCAGTGATTTTCCTCAGGGATATTATTTTTAAGGGAGAGGCGAAGAATGAAAACAGATTTACAGCATAAACTCAGTCAGGCG