PF03063


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03063, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03063
Description Prismane/CO dehydrogenase family

Occurence in the database

PF03063 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_887 FBDBKF_04565 107979 109631 -1 hcp hydroxylamine reductase Morganella morganii S1
1 group_887 EHELCC_05855 167436 169088 -1 hcp hydroxylamine reductase Morganella morganii S2
2 group_887 NLDBIP_06175 208501 210153 -1 hcp hydroxylamine reductase Morganella morganii S4
3 group_887 LHKJJB_03055 186025 187677 -1 hcp hydroxylamine reductase Morganella morganii S3
4 group_887 HKOGLL_06530 107889 109541 -1 hcp hydroxylamine reductase Morganella morganii S5
5 group_887 F4V73_RS09020 1882864 1884519 -1 hcp hydroxylamine reductase Morganella psychrotolerans
6 group_887 PMI_RS10405 2283644 2285296 -1 hcp hydroxylamine reductase Proteus mirabilis HI4320