Orthogroup:group_956


Homologs in group_956

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05235 FBDBKF_05235 Morganella morganii S1 dbpA ATP-dependent RNA helicase DbpA
EHELCC_12355 EHELCC_12355 Morganella morganii S2 dbpA ATP-dependent RNA helicase DbpA
NLDBIP_12695 NLDBIP_12695 Morganella morganii S4 dbpA ATP-dependent RNA helicase DbpA
LHKJJB_12555 LHKJJB_12555 Morganella morganii S3 dbpA ATP-dependent RNA helicase DbpA
HKOGLL_11170 HKOGLL_11170 Morganella morganii S5 dbpA ATP-dependent RNA helicase DbpA
F4V73_RS05690 F4V73_RS05690 Morganella psychrotolerans dbpA ATP-dependent RNA helicase DbpA
PMI_RS00530 PMI_RS00530 Proteus mirabilis HI4320 dbpA ATP-dependent RNA helicase DbpA

Distribution of group_956 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_956 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_956

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_956.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dbpA 7

Product

# Product Occurence
1 ATP-dependent RNA helicase DbpA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0513 7 L Replication, recombination and repair (L) Superfamily II DNA and RNA helicase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05591 7 ATP-dependent RNA helicase DbpA [EC:3.6.4.13] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00270 7 DEAD/DEAH box helicase
PF00271 7 Helicase conserved C-terminal domain
PF03880 7 DbpA RNA binding domain

Annotations of the 569 SwissProt hits

Annotation Number of occurrences
ATP-dependent RNA helicase CshA 2
ATP-dependent RNA helicase DBP2 18
ATP-dependent RNA helicase DBP2-A 2
ATP-dependent RNA helicase DBP3 17
ATP-dependent RNA helicase DBP8 9
ATP-dependent RNA helicase DDX18 1
ATP-dependent RNA helicase DDX3X 2
ATP-dependent RNA helicase DDX4 1
ATP-dependent RNA helicase DDX42 5
ATP-dependent RNA helicase DDX47 1
ATP-dependent RNA helicase DED1 4
ATP-dependent RNA helicase DHH1 19
ATP-dependent RNA helicase DRS1 10
ATP-dependent RNA helicase DbpA 4
ATP-dependent RNA helicase DeaD 11
ATP-dependent RNA helicase FAL1 20
ATP-dependent RNA helicase RhlB 120
ATP-dependent RNA helicase RhlE 1
ATP-dependent RNA helicase SUB2 6
ATP-dependent RNA helicase SUB2-1 1
ATP-dependent RNA helicase SUB2-2 1
ATP-dependent RNA helicase SrmB 2
ATP-dependent RNA helicase VAD1 1
ATP-dependent RNA helicase abstrakt 1
ATP-dependent RNA helicase bel 1
ATP-dependent RNA helicase cgh-1 1
ATP-dependent RNA helicase dbp-3 1
ATP-dependent RNA helicase dbp2 10
ATP-dependent RNA helicase dbp3 10
ATP-dependent RNA helicase dbp8 5
ATP-dependent RNA helicase ddx46 1
ATP-dependent RNA helicase ddx6 1
ATP-dependent RNA helicase dhh1 8
ATP-dependent RNA helicase drs1 1
ATP-dependent RNA helicase eIF4A 21
ATP-dependent RNA helicase fal-1 1
ATP-dependent RNA helicase fal1 10
ATP-dependent RNA helicase glh-1 1
ATP-dependent RNA helicase has1 1
ATP-dependent RNA helicase mak5 1
ATP-dependent RNA helicase me31b 1
ATP-dependent RNA helicase p62 1
ATP-dependent RNA helicase sub2 4
ATP-dependent RNA helicase uap56 1
ATP-dependent RNA helicase vasa 1
ATP-dependent RNA helicase-like protein DB10 1
ATP-dependent rRNA helicase RRP3 22
ATP-dependent rRNA helicase rrp-3 1
ATP-dependent rRNA helicase rrp3 10
DEAD-box ATP-dependent RNA helicase 10 3
DEAD-box ATP-dependent RNA helicase 12 2
DEAD-box ATP-dependent RNA helicase 14 2
DEAD-box ATP-dependent RNA helicase 15 2
DEAD-box ATP-dependent RNA helicase 20 2
DEAD-box ATP-dependent RNA helicase 21 2
DEAD-box ATP-dependent RNA helicase 24 2
DEAD-box ATP-dependent RNA helicase 25 1
DEAD-box ATP-dependent RNA helicase 26 1
DEAD-box ATP-dependent RNA helicase 3, chloroplastic 2
DEAD-box ATP-dependent RNA helicase 30 2
DEAD-box ATP-dependent RNA helicase 31 1
DEAD-box ATP-dependent RNA helicase 34 1
DEAD-box ATP-dependent RNA helicase 35 1
DEAD-box ATP-dependent RNA helicase 35A 1
DEAD-box ATP-dependent RNA helicase 36 1
DEAD-box ATP-dependent RNA helicase 37 1
DEAD-box ATP-dependent RNA helicase 3A, chloroplastic 1
DEAD-box ATP-dependent RNA helicase 3B, chloroplastic 1
DEAD-box ATP-dependent RNA helicase 40 2
DEAD-box ATP-dependent RNA helicase 42 1
DEAD-box ATP-dependent RNA helicase 46 1
DEAD-box ATP-dependent RNA helicase 48 1
DEAD-box ATP-dependent RNA helicase 5 2
DEAD-box ATP-dependent RNA helicase 52A 1
DEAD-box ATP-dependent RNA helicase 52B 1
DEAD-box ATP-dependent RNA helicase 52C 1
DEAD-box ATP-dependent RNA helicase 53 1
DEAD-box ATP-dependent RNA helicase 53, mitochondrial 1
DEAD-box ATP-dependent RNA helicase 56 2
DEAD-box ATP-dependent RNA helicase 6 2
DEAD-box ATP-dependent RNA helicase 8 2
DEAD-box ATP-dependent RNA helicase 9 1
DEAD-box ATP-dependent RNA helicase 9, mitochondrial 1
DEAD-box ATP-dependent RNA helicase CshA 24
DEAD-box ATP-dependent RNA helicase CshB 3
DEAD-box ATP-dependent RNA helicase CshE 1
DEAD-box ATP-dependent RNA helicase RhpA 2
Eukaryotic initiation factor 4A 6
Eukaryotic initiation factor 4A-1 2
Eukaryotic initiation factor 4A-10 1
Eukaryotic initiation factor 4A-11 1
Eukaryotic initiation factor 4A-14 1
Eukaryotic initiation factor 4A-15 1
Eukaryotic initiation factor 4A-2 2
Eukaryotic initiation factor 4A-3 3
Eukaryotic initiation factor 4A-7 1
Eukaryotic initiation factor 4A-8 1
Eukaryotic initiation factor 4A-9 1
Eukaryotic initiation factor 4A-I 6
Eukaryotic initiation factor 4A-I (Fragment) 1
Eukaryotic initiation factor 4A-III 12
Eukaryotic initiation factor 4A-III homolog 1
Eukaryotic initiation factor 4A-III homolog A 1
Eukaryotic initiation factor 4A-III homolog B 1
Eukaryotic initiation factor 4A-III-A 1
Eukaryotic initiation factor 4A-III-B 1
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 2
Pre-mRNA-processing ATP-dependent RNA helicase prp-5 1
Pre-mRNA-processing ATP-dependent RNA helicase prp11 1
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 4
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 4
Probable ATP-dependent RNA helicase DDX17 2
Probable ATP-dependent RNA helicase DDX27 3
Probable ATP-dependent RNA helicase DDX4 7
Probable ATP-dependent RNA helicase DDX41 2
Probable ATP-dependent RNA helicase DDX46 5
Probable ATP-dependent RNA helicase DDX47 3
Probable ATP-dependent RNA helicase DDX49 2
Probable ATP-dependent RNA helicase DDX5 5
Probable ATP-dependent RNA helicase DDX6 4
Probable ATP-dependent RNA helicase DDX6 (Fragment) 1
Probable ATP-dependent RNA helicase Dbp45A 1
Probable ATP-dependent RNA helicase MJ0669 1
Probable ATP-dependent RNA helicase ddx17 1
Probable ATP-dependent RNA helicase ddx27 1
Probable ATP-dependent RNA helicase ddx3 1
Probable ATP-dependent RNA helicase ddx41 1
Probable ATP-dependent RNA helicase ddx42 1
Probable ATP-dependent RNA helicase ddx47 1
Probable ATP-dependent RNA helicase ddx49 1
Probable ATP-dependent RNA helicase ddx6 2
Probable ATP-dependent RNA helicase vasa-like 1
Probable eukaryotic initiation factor 4A 5
Putative ATP-dependent RNA helicase Pl10 1
Putative ATP-dependent RNA helicase T26G10.1 1
Putative ATP-dependent RNA helicase an3 1
Putative ATP-dependent RNA helicase ste13 1
Putative DEAD-box ATP-dependent RNA helicase 43 1
Putative DEAD-box RNA helicase HEL64 1
RNA helicase CrhR 1
Spliceosome RNA helicase DDX39B homolog 1

Protein length

Unique protein length 457

Protein length distribution