PF02824


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02824, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02824
Description TGS domain

Occurence in the database

PF02824 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_346 FBDBKF_12050 59907 62012 1 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase Morganella morganii S1
1 group_1811 FBDBKF_13430 62469 64400 -1 thrS threonine--tRNA ligase Morganella morganii S1
2 group_1873 FBDBKF_13985 92358 94592 -1 relA GTP diphosphokinase Morganella morganii S1
3 group_1811 EHELCC_08665 210791 212722 1 thrS threonine--tRNA ligase Morganella morganii S2
4 group_1873 EHELCC_11660 177234 179468 -1 relA GTP diphosphokinase Morganella morganii S2
5 group_346 EHELCC_14255 72693 74798 -1 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase Morganella morganii S2
6 group_1811 NLDBIP_08990 210791 212722 1 thrS threonine--tRNA ligase Morganella morganii S4
7 group_1873 NLDBIP_12000 177234 179468 -1 relA GTP diphosphokinase Morganella morganii S4
8 group_346 NLDBIP_15350 76630 78735 -1 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase Morganella morganii S4
9 group_1811 LHKJJB_05275 44437 46368 -1 thrS threonine--tRNA ligase Morganella morganii S3
10 group_1873 LHKJJB_11860 177234 179468 -1 relA GTP diphosphokinase Morganella morganii S3
11 group_346 LHKJJB_15260 59907 62012 1 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase Morganella morganii S3
12 group_1811 HKOGLL_05640 195382 197313 1 thrS threonine--tRNA ligase Morganella morganii S5
13 group_1873 HKOGLL_10475 177234 179468 -1 relA GTP diphosphokinase Morganella morganii S5
14 group_346 HKOGLL_14380 46570 48675 1 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase Morganella morganii S5
15 group_1811 F4V73_RS03335 711415 713343 1 thrS threonine--tRNA ligase Morganella psychrotolerans
16 group_1873 F4V73_RS12840 169874 172108 -1 relA GTP diphosphokinase Morganella psychrotolerans
17 group_346 F4V73_RS14595 152366 154471 -1 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase Morganella psychrotolerans
18 group_1873 PMI_RS01045 257486 259726 1 relA GTP diphosphokinase Proteus mirabilis HI4320
19 group_1811 PMI_RS05025 1098276 1100204 1 thrS threonine--tRNA ligase Proteus mirabilis HI4320
20 group_346 PMI_RS14155 3140945 3143071 1 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase Proteus mirabilis HI4320