Homologs in group_1873

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13985 FBDBKF_13985 95.4 Morganella morganii S1 relA GTP diphosphokinase
EHELCC_11660 EHELCC_11660 95.4 Morganella morganii S2 relA GTP diphosphokinase
NLDBIP_12000 NLDBIP_12000 95.4 Morganella morganii S4 relA GTP diphosphokinase
LHKJJB_11860 LHKJJB_11860 95.4 Morganella morganii S3 relA GTP diphosphokinase
HKOGLL_10475 HKOGLL_10475 95.4 Morganella morganii S5 relA GTP diphosphokinase
PMI_RS01045 PMI_RS01045 82.5 Proteus mirabilis HI4320 relA GTP diphosphokinase

Distribution of the homologs in the orthogroup group_1873

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1873

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AG23 0.0 1197 77 1 741 3 relA GTP pyrophosphokinase Shigella flexneri
P0AG20 0.0 1197 77 1 741 1 relA GTP pyrophosphokinase Escherichia coli (strain K12)
P0AG21 0.0 1197 77 1 741 3 relA GTP pyrophosphokinase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AG22 0.0 1197 77 1 741 3 relA GTP pyrophosphokinase Escherichia coli O157:H7
P44644 0.0 980 62 6 747 3 relA GTP pyrophosphokinase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P55133 0.0 980 62 3 743 3 relA GTP pyrophosphokinase Photobacterium angustum (strain S14 / CCUG 15956)
O54408 6.72e-174 519 37 10 692 1 relA GTP pyrophosphokinase Bacillus subtilis (strain 168)
Q6GG70 3.96e-169 507 38 12 693 3 relA GTP pyrophosphokinase Staphylococcus aureus (strain MRSA252)
P0A0E9 5.83e-169 506 38 12 693 3 relA GTP pyrophosphokinase Staphylococcus aureus (strain MW2)
P0A0F0 5.83e-169 506 38 12 693 3 relA GTP pyrophosphokinase Staphylococcus aureus
Q6G8T5 5.83e-169 506 38 12 693 3 relA GTP pyrophosphokinase Staphylococcus aureus (strain MSSA476)
Q99TL8 5.83e-169 506 38 12 693 1 relA GTP pyrophosphokinase Staphylococcus aureus (strain N315)
Q931Q4 1.79e-168 505 38 12 693 1 relA GTP pyrophosphokinase Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q8CS97 3.99e-161 486 37 10 690 3 relA GTP pyrophosphokinase Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HNR8 3.99e-161 486 37 10 690 3 relA GTP pyrophosphokinase Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
P74007 3.08e-160 485 38 14 696 3 spoT Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O52177 1.19e-159 483 37 11 705 3 relA GTP pyrophosphokinase Myxococcus xanthus
P52560 6.44e-157 479 37 14 735 3 relA GTP pyrophosphokinase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q54089 1.67e-153 467 37 14 699 1 relA Bifunctional (p)ppGpp synthase/hydrolase RelA Streptococcus dysgalactiae subsp. equisimilis
O87331 1.07e-152 466 35 11 696 3 relA GTP pyrophosphokinase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
P9WHG9 3.47e-151 461 37 9 651 1 relA Bifunctional (p)ppGpp synthase/hydrolase RelA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WHG8 3.47e-151 461 37 9 651 3 relA Bifunctional (p)ppGpp synthase/hydrolase RelA Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P66015 6.6e-151 462 37 9 651 3 relA Probable GTP pyrophosphokinase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q49640 7.91e-148 454 37 9 651 3 relA Probable GTP pyrophosphokinase Mycobacterium leprae (strain TN)
O85709 7.61e-147 453 35 10 727 3 relA GTP pyrophosphokinase Streptomyces antibioticus
O67012 1.43e-145 445 36 10 678 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Aquifex aeolicus (strain VF5)
Q9KNM2 1.93e-125 393 31 8 684 1 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P0AG26 1.68e-123 388 32 12 690 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Shigella flexneri
P0AG24 1.68e-123 388 32 12 690 1 spoT Bifunctional (p)ppGpp synthase/hydrolase SpoT Escherichia coli (strain K12)
P0AG25 1.68e-123 388 32 12 690 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Escherichia coli O157:H7
P43811 2.68e-108 347 30 11 689 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8CY42 6.97e-108 348 31 13 714 1 rsh GTP pyrophosphokinase rsh Brucella suis biovar 1 (strain 1330)
Q8YG65 3.31e-106 344 31 13 714 1 rsh GTP pyrophosphokinase rsh Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
O34098 3.51e-106 344 29 16 748 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Spiroplasma citri
A5VPI9 3.72e-106 344 31 13 724 3 rsh GTP pyrophosphokinase rsh Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
Q57E90 1.74e-105 342 31 13 714 1 rsh GTP pyrophosphokinase rsh Brucella abortus biovar 1 (strain 9-941)
Q2YN11 1.74e-105 342 31 13 714 3 rsh GTP pyrophosphokinase rsh Brucella abortus (strain 2308)
O51216 7.85e-89 296 35 6 449 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
P0DKG8 2.86e-63 230 26 22 726 1 RSH1 Putative GTP diphosphokinase RSH1, chloroplastic Arabidopsis thaliana
F4JHA2 6.04e-62 226 26 23 727 1 RSH1 Putative GTP diphosphokinase RSH1, chloroplastic Arabidopsis thaliana
Q9SYH1 1.66e-60 220 37 7 335 2 RSH3 Probable GTP diphosphokinase RSH3, chloroplastic Arabidopsis thaliana
Q9M5P5 1.17e-58 214 37 8 335 2 RSH3 Probable GTP diphosphokinase RSH3, chloroplastic Arabidopsis thaliana
Q9AYT5 2.11e-57 214 28 10 489 2 RSH1 Putative GTP diphosphokinase RSH1, chloroplastic Oryza sativa subsp. japonica
Q9LVJ3 2.36e-57 211 36 6 333 2 RSH2 Probable GTP diphosphokinase RSH2, chloroplastic Arabidopsis thaliana
Q9M5P6 7.12e-56 207 35 6 333 2 RSH2 Probable GTP diphosphokinase RSH2, chloroplastic Arabidopsis thaliana
Q67UU0 2.52e-55 205 35 5 328 2 RSH3 Probable GTP diphosphokinase RSH3, chloroplastic Oryza sativa subsp. japonica
Q7XAP4 2.46e-53 199 35 5 332 2 RSH2 Probable GTP diphosphokinase RSH2, chloroplastic Oryza sativa subsp. japonica
P75386 1.79e-40 162 25 15 635 3 spoT Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P47520 7.23e-34 142 27 2 323 3 spoT Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
Q6ATB4 5.1e-26 117 28 6 317 1 CRSH1 GTP diphosphokinase CRSH1, chloroplastic Oryza sativa subsp. japonica
Q84R11 3.75e-24 111 27 6 325 2 CRSH Probable GTP diphosphokinase CRSH, chloroplastic Arabidopsis thaliana
Q4UMH6 2.49e-22 106 31 3 208 4 RF_0381 Putative ankyrin repeat protein RF_0381 Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q6ATB2 4.56e-19 95 24 8 323 1 CRSH2 GTP diphosphokinase CRSH2, chloroplastic Oryza sativa subsp. japonica
Q75IS2 2.69e-18 92 23 6 331 1 CRSH3 GTP diphosphokinase CRSH3, chloroplastic Oryza sativa subsp. japonica
P39583 1.14e-05 50 29 2 119 1 ywaC GTP pyrophosphokinase YwaC Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12840
Feature type CDS
Gene relA
Product GTP diphosphokinase
Location 169874 - 172108 (strand: -1)
Length 2235 (nucleotides) / 744 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1873
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02824 TGS domain
PF04607 Region found in RelA / SpoT proteins
PF13291 ACT domain
PF13328 HD domain
PF19296 RelA/SpoT, AH and RIS domains

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0317 Signal transduction mechanisms (T)
Transcription (K)		 TK (p)ppGpp synthase/hydrolase, HD superfamily

Protein Sequence

MVAVRSAHLTPAGEFDPVHWINSLGLHGHATGEKLEEVWHYCHQQVDGHQDAALLLGRGIEMVEILTTLSMDLDSLRAALLFPLAEAGILDEEKIGEAFGPAIWLLVKGVMDMDAIRQLKATHNDETSSVQVDNIRRMLLSMVEDFRCVVIKLAERIAHLREVKDACEDERILAAKECFNIYAPLANRLGIGQLKWELEDYCFRYLHSDDYKRIASLLHERRLDREEYIDNFVTSLRNDMKKEDIQAEIYGRPKHIYSIWRKMQKKALTFDELFDVRAVRIVVERLQDCYAALGIVHTHFRHLPDEFDDYVANPKPNGYQSIHTVVLGPQGKTLEIQIRTRQMHEDAELGVAAHWKYKEGTAVAGKTGSYENRIAWLRKLIAWQEEMSDSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFSYLLQMGDQIEVITQKQPNPSRDWLNPNLGYVTTSRGRAKIHNWFRKQDRDKNIIAGRQMLDNELAAQDLSLKEAEKLLIARYNVHSIDEVLAGIGVGDIRINQLSNFLQSKLNKPTAEEADREALKTLEKAPPAKPAPAHQNSGRIVVEGVGNLMHHIARCCQPIPGDNITGFITKGRGISIHRADCEQLLELQEQAPERLVEAVWSASYSSGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVRSHSDVKQQIATIDMDVEIYNIQTLSRVLVKLSQLPDVIEAKRHTQ

Flanking regions ( +/- flanking 50bp)

CGATGGTGCTGTTTACAAAGACACCACCGGTCAGTCAGTAGGGAGAATTTATGGTTGCGGTAAGAAGTGCGCATTTAACACCCGCCGGTGAGTTTGATCCGGTTCACTGGATTAACAGTCTCGGGCTGCATGGTCATGCAACGGGTGAGAAACTGGAAGAAGTCTGGCATTACTGTCATCAGCAGGTTGATGGACATCAGGATGCGGCGCTGTTGTTGGGGCGCGGTATTGAGATGGTGGAAATTTTAACCACCCTCAGTATGGATTTGGACAGTTTACGCGCAGCTTTGCTTTTTCCGCTGGCTGAGGCGGGCATCCTTGATGAGGAAAAGATCGGCGAGGCCTTTGGTCCTGCTATCTGGCTGTTGGTCAAAGGTGTGATGGATATGGACGCTATCCGTCAGTTGAAAGCGACCCATAACGACGAAACAAGCTCGGTGCAGGTGGATAACATCCGCCGTATGCTGCTGTCGATGGTGGAAGATTTCCGCTGCGTGGTTATCAAGCTGGCTGAGCGTATCGCCCATCTGCGGGAAGTCAAAGACGCCTGTGAAGATGAACGCATACTGGCGGCGAAAGAGTGTTTTAATATTTATGCGCCGCTGGCAAATCGCCTCGGGATCGGACAACTGAAATGGGAGTTGGAAGATTATTGCTTCCGCTACCTGCATTCCGATGATTATAAACGCATTGCCAGCCTGCTGCATGAGCGGCGTCTTGATCGCGAAGAGTATATCGACAACTTTGTCACCTCTTTGCGTAACGACATGAAAAAAGAAGATATTCAGGCTGAAATTTACGGGCGTCCGAAACATATTTACAGTATCTGGCGCAAGATGCAGAAAAAAGCACTCACGTTTGATGAGCTGTTTGATGTCCGCGCGGTGCGGATTGTTGTCGAGCGCCTCCAGGATTGCTACGCAGCGCTGGGGATCGTCCACACACATTTCCGTCATTTGCCGGATGAGTTTGATGACTATGTGGCGAACCCGAAACCAAACGGTTATCAGTCAATTCATACCGTTGTATTAGGTCCGCAGGGTAAAACCCTGGAAATTCAGATCCGCACCCGTCAGATGCATGAAGATGCAGAGCTGGGGGTTGCCGCGCACTGGAAATACAAAGAAGGCACGGCAGTAGCCGGTAAAACAGGTAGTTACGAGAACCGGATTGCCTGGCTGCGCAAACTTATCGCGTGGCAGGAAGAAATGTCGGATTCCGGCGAAATGCTGGATGAAGTGCGCAGTCAGGTCTTTGATGATCGGGTTTACGTATTTACACCTAAAGGCGATGTGGTGGATTTACCGGCCGGCTCCACGCCGCTGGATTTTGCCTATCATATCCACAGTGATGTGGGACACCGGTGTATCGGGGCGAAAATCGGCGGGCGCATTGTGCCGTTCAGCTACCTGTTACAGATGGGCGATCAGATTGAAGTGATCACTCAGAAACAGCCGAACCCGAGCCGTGACTGGCTGAATCCGAACCTGGGCTATGTAACCACCAGCCGCGGACGCGCTAAGATCCACAACTGGTTCCGCAAGCAGGATCGCGATAAAAATATTATTGCCGGACGTCAGATGCTGGATAACGAACTGGCGGCGCAGGATCTCAGTCTGAAAGAAGCTGAAAAACTGCTGATCGCCCGTTATAACGTTCATTCTATTGATGAAGTCCTCGCCGGTATTGGCGTGGGTGATATCAGGATTAATCAGTTATCTAACTTCCTGCAAAGCAAGCTGAATAAACCGACAGCCGAAGAAGCCGATCGCGAAGCGCTGAAAACACTGGAAAAAGCACCGCCGGCGAAACCGGCTCCGGCGCACCAGAACAGCGGGCGCATTGTGGTCGAAGGTGTCGGCAATCTGATGCACCATATTGCGCGCTGCTGTCAGCCAATCCCCGGCGATAACATTACCGGGTTTATCACCAAAGGGCGCGGGATCTCCATCCACCGTGCCGACTGTGAGCAGTTGCTGGAGTTACAGGAACAGGCACCGGAGCGGCTGGTGGAAGCGGTCTGGAGTGCGAGCTACTCCAGTGGTTACTCACTGGTTGTGCGCGTGGTGGCGAATGACCGCAGCGGCCTGTTGCGGGATATCACCACCATCCTTGCCAATGAAAAAGTCAATGTGCTGGGTGTGCGCAGTCACAGTGATGTAAAACAGCAGATAGCGACCATTGATATGGATGTGGAAATTTACAACATCCAGACACTCAGCCGCGTGTTGGTAAAACTGAGCCAGTTGCCGGATGTGATTGAGGCAAAACGCCATACACAGTGATCCCGCAGAGGCTGTTTACTTATATACCCTTATTCATTCAAACCGCAGGT