Orthogroup:group_313


Homologs in group_313

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09295 FBDBKF_09295 Morganella morganii S1 flhB Flagellar biosynthesis protein FlhB
EHELCC_10115 EHELCC_10115 Morganella morganii S2 flhB Flagellar biosynthesis protein FlhB
NLDBIP_10460 NLDBIP_10460 Morganella morganii S4 flhB Flagellar biosynthesis protein FlhB
LHKJJB_10895 LHKJJB_10895 Morganella morganii S3 flhB Flagellar biosynthesis protein FlhB
HKOGLL_13955 HKOGLL_13955 Morganella morganii S5 flhB Flagellar biosynthesis protein FlhB
F4V73_RS08350 F4V73_RS08350 Morganella psychrotolerans - EscU/YscU/HrcU family type III secretion system export apparatus switch protein
F4V73_RS10670 F4V73_RS10670 Morganella psychrotolerans - EscU/YscU/HrcU family type III secretion system export apparatus switch protein
PMI_RS13230 PMI_RS13230 Proteus mirabilis HI4320 - EscU/YscU/HrcU family type III secretion system export apparatus switch protein

Distribution of group_313 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_313 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_313

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_313.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 flhB 5
2 - 3

Product

# Product Occurence
1 Flagellar biosynthesis protein FlhB 5
2 EscU/YscU/HrcU family type III secretion system export apparatus switch protein 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1377 8 N Cell motility (N) Flagellar biosynthesis protein FlhB

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K22510 7 type III secretion system export apparatus switch protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01312 8 FlhB HrpN YscU SpaS Family

Annotations of the 30 SwissProt hits

Annotation Number of occurrences
Flagellar biosynthetic protein FlhB 13
Hypersensitivity response secretion protein HrcU 1
Probable translocation protein y4yO 1
Secretion apparatus protein BsaZ 9
Secretion system apparatus protein SsaU 1
Surface presentation of antigens protein SpaS 3
Yop proteins translocation protein U 2

Protein length

Min length 349
Max length 354
Mean length (sd) 350.8 (2.4)
Median length 349.0

Protein length distribution