Orthogroup:group_1911


Homologs in group_1911

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14240 FBDBKF_14240 Morganella morganii S1 cvpA colicin V production protein
EHELCC_08040 EHELCC_08040 Morganella morganii S2 cvpA colicin V production protein
NLDBIP_08365 NLDBIP_08365 Morganella morganii S4 cvpA colicin V production protein
LHKJJB_05900 LHKJJB_05900 Morganella morganii S3 cvpA colicin V production protein
HKOGLL_05015 HKOGLL_05015 Morganella morganii S5 cvpA colicin V production protein
F4V73_RS02670 F4V73_RS02670 Morganella psychrotolerans cvpA colicin V production protein
PMI_RS08750 PMI_RS08750 Proteus mirabilis HI4320 cvpA colicin V production protein

Distribution of group_1911 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1911 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1911

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1911.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 cvpA 7

Product

# Product Occurence
1 colicin V production protein 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1286 7 FM Nucleotide transport and metabolism (F)
Cell wall/membrane/envelope biogenesis (M)		 Colicin V production accessory protein CvpA, regulator of purF expression and biofilm formation

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03558 7 membrane protein required for colicin V production - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02674 7 Colicin V production protein

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Colicin V production protein 1
Colicin V production protein homolog 2

Protein length

Min length 163
Max length 168
Mean length (sd) 167.3 (1.9)
Median length 168.0

Protein length distribution