PF02698


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02698, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 15 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02698
Description DUF218 domain

Occurence in the database

PF02698 is associated with 15 different proteins (see tab "Protein list" and "Profile")
The 15 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1179 FBDBKF_06800 22735 23517 -1 sanA outer membrane permeability protein SanA Morganella morganii S1
1 group_1237 FBDBKF_07200 113376 114173 -1 elyC envelope biogenesis factor ElyC Morganella morganii S1
2 group_1237 EHELCC_03770 72013 72810 1 elyC envelope biogenesis factor ElyC Morganella morganii S2
3 group_1179 EHELCC_04170 162669 163451 1 sanA outer membrane permeability protein SanA Morganella morganii S2
4 group_1237 NLDBIP_03770 71809 72606 1 elyC envelope biogenesis factor ElyC Morganella morganii S4
5 group_1179 NLDBIP_04170 162465 163247 1 sanA outer membrane permeability protein SanA Morganella morganii S4
6 group_1237 LHKJJB_09600 71923 72720 1 elyC envelope biogenesis factor ElyC Morganella morganii S3
7 group_1179 LHKJJB_10000 162579 163361 1 sanA outer membrane permeability protein SanA Morganella morganii S3
8 group_1179 HKOGLL_08975 27691 28473 -1 sanA outer membrane permeability protein SanA Morganella morganii S5
9 group_1237 HKOGLL_09375 118332 119129 -1 elyC envelope biogenesis factor ElyC Morganella morganii S5
10 group_1179 F4V73_RS00940 199488 200246 -1 sanA outer membrane permeability protein SanA Morganella psychrotolerans
11 group_1237 F4V73_RS01385 301660 302451 -1 elyC envelope biogenesis factor ElyC Morganella psychrotolerans
12 group_1179 PMI_RS03160 697067 697792 -1 sanA outer membrane permeability protein SanA Proteus mirabilis HI4320
13 group_1237 PMI_RS03555 793509 794339 -1 elyC envelope biogenesis factor ElyC Proteus mirabilis HI4320
14 group_4599 PMI_RS12375 2743195 2744334 -1 YdcF family protein Proteus mirabilis HI4320