Homologs in group_1179

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06800 FBDBKF_06800 68.5 Morganella morganii S1 sanA outer membrane permeability protein SanA
EHELCC_04170 EHELCC_04170 68.5 Morganella morganii S2 sanA outer membrane permeability protein SanA
NLDBIP_04170 NLDBIP_04170 68.5 Morganella morganii S4 sanA outer membrane permeability protein SanA
LHKJJB_10000 LHKJJB_10000 68.5 Morganella morganii S3 sanA outer membrane permeability protein SanA
HKOGLL_08975 HKOGLL_08975 68.5 Morganella morganii S5 sanA outer membrane permeability protein SanA
F4V73_RS00940 F4V73_RS00940 68.0 Morganella psychrotolerans sanA outer membrane permeability protein SanA

Distribution of the homologs in the orthogroup group_1179

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1179

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AFY5 3.58e-106 309 62 0 239 3 sanA Protein SanA Shigella flexneri
P0AFY2 3.58e-106 309 62 0 239 4 sanA Protein SanA Escherichia coli (strain K12)
P0AFY3 3.58e-106 309 62 0 239 3 sanA Protein SanA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AFY4 3.58e-106 309 62 0 239 3 sanA Protein SanA Escherichia coli O157:H7
P45130 1.68e-56 183 46 2 206 3 sanA Protein SanA homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P42598 3.24e-45 154 38 2 209 4 ygjQ Uncharacterized protein YgjQ Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03160
Feature type CDS
Gene sanA
Product outer membrane permeability protein SanA
Location 697067 - 697792 (strand: -1)
Length 726 (nucleotides) / 241 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1179
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02698 DUF218 domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2949 Cell wall/membrane/envelope biogenesis (M) M Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03748 SanA protein - -

Protein Sequence

MLKRLIYLFLTLFILVAVALIACDRWIGVKTSPYIFEDIDKLPAKKVGMVLGTAKYYTTGYLNQFYQYRIQGAVNAYNSGKVQYLLLSGDNAQHSYNEPNTMRKDLIKAGIPASRIVMDFAGFRTLDSVVRTKEVFGTDGFTIITQRFHCERAVFIALEKGIDAQCFAVASPKSMFKVRVREVLARAGAVVDLYILKREPRFLGPPEAIPAVQNIPDDIKGYPAVSPQEVEALPLNNGKNS

Flanking regions ( +/- flanking 50bp)

TCAAGTAGCCTTTAACCTATTAGAAAACCCTGAGTCATTAAGGCAAGGATATGCTAAAGCGCCTCATTTATCTCTTTTTGACCCTTTTTATCTTAGTTGCGGTGGCATTAATTGCTTGTGATCGCTGGATAGGTGTAAAAACTAGCCCCTATATATTTGAAGATATAGATAAACTACCCGCCAAAAAAGTAGGCATGGTATTAGGTACTGCTAAATATTACACCACAGGCTATCTTAACCAATTTTATCAATATCGTATTCAAGGTGCTGTTAACGCCTATAACAGCGGCAAAGTGCAATATCTGTTACTCAGTGGAGATAATGCACAGCATAGCTATAATGAACCCAATACGATGCGTAAAGATTTAATTAAAGCAGGCATACCGGCATCGCGTATCGTTATGGATTTTGCTGGATTTAGAACTTTAGATTCGGTAGTACGCACAAAAGAAGTGTTTGGGACAGATGGCTTTACTATTATCACTCAGCGTTTCCATTGCGAACGAGCCGTATTTATTGCCCTTGAAAAAGGCATTGATGCTCAGTGTTTTGCTGTTGCTTCGCCGAAGAGTATGTTTAAGGTGCGTGTACGTGAAGTTTTAGCCAGAGCAGGTGCGGTTGTCGATCTCTATATATTAAAACGTGAACCGCGTTTTCTAGGTCCACCAGAAGCCATACCTGCTGTACAAAATATTCCTGATGATATTAAGGGCTATCCGGCGGTTTCACCACAAGAGGTAGAAGCTTTGCCATTAAACAATGGCAAAAACAGTTAAAAGCGTTTTGATAACCCTGTTGACGAGTGGCGCCACAGCCACTCGATTGG