Homologs in group_1237

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07200 FBDBKF_07200 65.6 Morganella morganii S1 elyC envelope biogenesis factor ElyC
EHELCC_03770 EHELCC_03770 65.6 Morganella morganii S2 elyC envelope biogenesis factor ElyC
NLDBIP_03770 NLDBIP_03770 65.6 Morganella morganii S4 elyC envelope biogenesis factor ElyC
LHKJJB_09600 LHKJJB_09600 65.6 Morganella morganii S3 elyC envelope biogenesis factor ElyC
HKOGLL_09375 HKOGLL_09375 65.6 Morganella morganii S5 elyC envelope biogenesis factor ElyC
F4V73_RS01385 F4V73_RS01385 64.2 Morganella psychrotolerans elyC envelope biogenesis factor ElyC

Distribution of the homologs in the orthogroup group_1237

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1237

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AB01 5.06e-84 255 56 2 257 4 elyC Envelope biogenesis factor ElyC Escherichia coli (strain K12)
P0AB02 5.06e-84 255 56 2 257 3 elyC Envelope biogenesis factor ElyC Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03555
Feature type CDS
Gene elyC
Product envelope biogenesis factor ElyC
Location 793509 - 794339 (strand: -1)
Length 831 (nucleotides) / 276 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1237
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02698 DUF218 domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1434 Cell wall/membrane/envelope biogenesis (M) M Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family

Protein Sequence

MLFLLKKYLGSLIMPLPLLLIIAFFALILLWFTRWQKTGKSVLTIVIVLLTLLGMQPVADTLLMPSEKAYQARYELRENSPQDVNYIVVLGGGFTYNPEWAPSANLLNNSLFRVAEGVRLYYRYPNASLIFTGGAGVNKISSAEVAAQVAQSLGVPAEKTIALSQPKDTEEEAYEVDKLIGKQPFLLVTSANHLARAERFFLARGMHPIVAPANQLAITTPLHPWEKYTPSAYYFQHSERAWYEFIGSIWQTIKPSESSNIEAVVENKNEADNGIK

Flanking regions ( +/- flanking 50bp)

CTAGATTTTTACTCTCAGTTGCTGACATTTCACTCAACTTAGGAAGATTTATGCTGTTTTTGCTCAAAAAATATCTTGGTAGCCTAATCATGCCACTACCGCTGTTATTAATAATTGCTTTTTTTGCGCTTATTTTACTGTGGTTTACTCGTTGGCAAAAAACAGGAAAAAGCGTACTCACTATCGTGATTGTGTTACTTACGCTGTTAGGCATGCAACCTGTCGCAGATACTCTATTGATGCCGAGTGAAAAAGCGTATCAAGCACGTTATGAATTACGCGAAAACTCACCACAAGATGTTAACTACATTGTCGTTTTAGGGGGCGGTTTTACTTATAACCCTGAATGGGCACCTAGTGCTAACCTGCTAAATAATAGCTTATTTCGTGTTGCTGAAGGCGTAAGGCTTTATTATCGTTATCCTAATGCCAGCTTAATTTTTACCGGTGGTGCCGGCGTCAATAAAATAAGTAGCGCCGAAGTGGCTGCACAAGTTGCACAATCATTAGGTGTTCCAGCAGAAAAAACGATCGCCCTTTCTCAACCTAAAGATACCGAAGAAGAAGCGTATGAAGTGGATAAACTTATCGGTAAACAACCTTTTTTATTGGTGACCTCAGCAAACCATTTAGCGCGGGCAGAACGTTTCTTTTTAGCTAGAGGTATGCACCCTATTGTTGCACCTGCTAATCAGCTAGCCATTACTACCCCTCTGCATCCTTGGGAAAAATATACCCCTTCCGCGTATTATTTTCAGCATAGTGAGCGAGCATGGTATGAATTTATCGGCTCGATTTGGCAAACCATAAAGCCTAGCGAATCATCTAATATAGAGGCGGTTGTTGAGAATAAAAATGAAGCTGACAATGGCATAAAATAGCGTATGAAGAATGAGATCATTAGGTAAAAAAATAATCAATCCTCTTTTTT