Homologs in group_1179

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06800 FBDBKF_06800 100.0 Morganella morganii S1 sanA outer membrane permeability protein SanA
EHELCC_04170 EHELCC_04170 100.0 Morganella morganii S2 sanA outer membrane permeability protein SanA
NLDBIP_04170 NLDBIP_04170 100.0 Morganella morganii S4 sanA outer membrane permeability protein SanA
HKOGLL_08975 HKOGLL_08975 100.0 Morganella morganii S5 sanA outer membrane permeability protein SanA
F4V73_RS00940 F4V73_RS00940 91.7 Morganella psychrotolerans sanA outer membrane permeability protein SanA
PMI_RS03160 PMI_RS03160 68.5 Proteus mirabilis HI4320 sanA outer membrane permeability protein SanA

Distribution of the homologs in the orthogroup group_1179

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1179

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AFY5 2.8e-113 328 73 0 207 3 sanA Protein SanA Shigella flexneri
P0AFY2 2.8e-113 328 73 0 207 4 sanA Protein SanA Escherichia coli (strain K12)
P0AFY3 2.8e-113 328 73 0 207 3 sanA Protein SanA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AFY4 2.8e-113 328 73 0 207 3 sanA Protein SanA Escherichia coli O157:H7
P45130 1.73e-54 179 43 2 215 3 sanA Protein SanA homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P42598 9.67e-43 148 40 4 201 4 ygjQ Uncharacterized protein YgjQ Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_10000
Feature type CDS
Gene sanA
Product outer membrane permeability protein SanA
Location 162579 - 163361 (strand: 1)
Length 783 (nucleotides) / 260 (amino acids)

Contig

Accession ZDB_366
Length 191897 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1179
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02698 DUF218 domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2949 Cell wall/membrane/envelope biogenesis (M) M Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03748 SanA protein - -

Protein Sequence

MGKARIWKRIILWMLAGIILAAAAAIAADRWISWKTAPYIYENINDLPPSEVGMVLGTAKYYKNGTINQYYRYRIQGAVNAYNSGKVKYLLLSGDNAQHSYNEPSTMRKDLVNAGIPASKIVLDFAGFRTLDSVVRTRKVFDTNGFTIITQRFHCERALYIAMEKGIEARCYAVSSPKNMFTVRAREVVARLGALADLYILNREPRFLGPQESIPAPQTLPENVPSYPAVTPEELNVLYPEPPAAPEKPADTTQPAPAAQ

Flanking regions ( +/- flanking 50bp)

AGTAATCTTAGCCTTATGATAACTATATAGTGATAAAGGTCTCAGTAATAATGGGAAAAGCCCGGATATGGAAACGGATCATTCTGTGGATGCTGGCAGGTATCATTCTGGCAGCAGCAGCGGCTATTGCGGCAGATCGCTGGATTAGCTGGAAAACCGCGCCTTATATCTATGAAAATATCAATGACCTGCCGCCGAGTGAAGTCGGCATGGTACTCGGTACGGCTAAGTACTATAAAAACGGGACAATTAACCAATATTACCGGTATCGTATTCAGGGTGCCGTAAATGCATACAATAGCGGCAAGGTGAAGTATCTGCTGCTGAGCGGCGATAATGCCCAGCACAGTTACAATGAGCCGAGCACGATGCGCAAGGATCTGGTGAATGCCGGGATCCCGGCCAGTAAAATTGTGCTCGATTTTGCCGGGTTCCGTACGCTGGATTCTGTGGTGCGGACACGAAAAGTCTTTGATACCAATGGCTTTACGATTATCACCCAGCGCTTCCATTGTGAACGGGCGCTGTATATCGCAATGGAAAAAGGCATTGAGGCGCGCTGTTACGCGGTTTCCTCCCCGAAGAATATGTTTACTGTCCGGGCGCGGGAAGTGGTTGCCCGGCTGGGCGCACTGGCTGATTTATATATTCTCAACCGCGAACCGCGTTTCCTCGGCCCGCAGGAGTCAATTCCGGCACCGCAAACCTTACCGGAGAATGTACCGTCATATCCGGCAGTGACACCGGAAGAGCTGAATGTACTTTATCCTGAGCCACCTGCGGCACCGGAAAAACCGGCGGATACCACACAACCGGCACCCGCCGCGCAATAACCCGGTTTCAGCGGGTCGCCAGCTTATTGGCTGCCTGCCGCCATAACCAC