PF02629


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02629, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02629
Description CoA binding domain

Occurence in the database

PF02629 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_326 FBDBKF_09805 55275 56147 -1 sucD succinate--CoA ligase subunit alpha Morganella morganii S1
1 group_326 EHELCC_04605 247240 248112 -1 sucD succinate--CoA ligase subunit alpha Morganella morganii S2
2 group_326 NLDBIP_04605 247036 247908 -1 sucD succinate--CoA ligase subunit alpha Morganella morganii S4
3 group_326 LHKJJB_14025 87470 88342 1 sucD succinate--CoA ligase subunit alpha Morganella morganii S3
4 group_326 HKOGLL_12510 56056 56928 -1 sucD succinate--CoA ligase subunit alpha Morganella morganii S5
5 group_326 F4V73_RS00540 116375 117247 1 sucD succinate--CoA ligase subunit alpha Morganella psychrotolerans
6 group_326 PMI_RS02815 619143 620015 1 sucD succinate--CoA ligase subunit alpha Proteus mirabilis HI4320
7 group_326 PMI_RS10850 2389925 2391592 -1 acyl-CoA synthetase FdrA Proteus mirabilis HI4320