Homologs in group_326

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09805 FBDBKF_09805 32.1 Morganella morganii S1 sucD succinate--CoA ligase subunit alpha
EHELCC_04605 EHELCC_04605 32.1 Morganella morganii S2 sucD succinate--CoA ligase subunit alpha
NLDBIP_04605 NLDBIP_04605 32.1 Morganella morganii S4 sucD succinate--CoA ligase subunit alpha
LHKJJB_14025 LHKJJB_14025 32.1 Morganella morganii S3 sucD succinate--CoA ligase subunit alpha
HKOGLL_12510 HKOGLL_12510 32.1 Morganella morganii S5 sucD succinate--CoA ligase subunit alpha
F4V73_RS00540 F4V73_RS00540 31.7 Morganella psychrotolerans sucD succinate--CoA ligase subunit alpha
PMI_RS02815 PMI_RS02815 31.0 Proteus mirabilis HI4320 sucD succinate--CoA ligase subunit alpha

Distribution of the homologs in the orthogroup group_326

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_326

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q47208 0.0 657 58 0 555 1 fdrA Protein FdrA Escherichia coli (strain K12)
P77187 2.53e-94 300 38 8 510 4 yahF Uncharacterized protein YahF Escherichia coli (strain K12)
P45102 1.75e-05 50 28 2 153 3 sucD Succinate--CoA ligase [ADP-forming] subunit alpha Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O67547 5.15e-05 48 26 6 205 3 sucD Succinate--CoA ligase [ADP-forming] subunit alpha Aquifex aeolicus (strain VF5)
O28098 0.000181 47 23 8 207 3 sucD2 Succinate--CoA ligase [ADP-forming] subunit alpha 2 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q1RH56 0.000205 47 26 7 208 3 sucD Succinate--CoA ligase [ADP-forming] subunit alpha Rickettsia bellii (strain RML369-C)
O26663 0.000227 47 22 4 199 3 sucD Succinate--CoA ligase [ADP-forming] subunit alpha Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
O28733 0.000497 45 22 7 204 3 sucD1 Succinate--CoA ligase [ADP-forming] subunit alpha 1 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
P0AGE9 0.000506 45 28 5 157 1 sucD Succinate--CoA ligase [ADP-forming] subunit alpha Escherichia coli (strain K12)
P0AGF0 0.000506 45 28 5 157 3 sucD Succinate--CoA ligase [ADP-forming] subunit alpha Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AGF1 0.000506 45 28 5 157 3 sucD Succinate--CoA ligase [ADP-forming] subunit alpha Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10850
Feature type CDS
Gene -
Product acyl-CoA synthetase FdrA
Location 2389925 - 2391592 (strand: -1)
Length 1668 (nucleotides) / 555 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_326
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF00549 CoA-ligase
PF02629 CoA binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0074 Energy production and conversion (C) C Succinyl-CoA synthetase, alpha subunit

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02381 FdrA protein - -

Protein Sequence

MIHAFIKKGSFQDSVSLMIISRKLSEAPEVEEISVMMGTPANKSLLDVTGFWHDIFNEATPNDICVSIKAESDDPAIIETISSALEEALADIANGQKSGNKLTTVRSWRTAKQKSPNANMLLISIAGEYAAELADTGLEDGCNVMLFSDNVSIADEKALKEKAAANGLIVMGPDCGTANIAGAPLAFANIAPKGSIGIVGASGTGIQEITSQIVLQRQGVSHAIGLGGRDLSEQIGGISAITAINMLAADPQTRVIAFVSKPPAPAVREKIIAEMKRHNKPIVAQFLGTTPEKYQDDNIYFTRTLDETARIAATLARVEDSAAQLPKVAGKKIIGLYAGGTLAAECAMLLSEQLNVAVDNEHKQGTMLDAQGHKIIDMGDDFYTQGKPHPMIDPSTRNKFISELSNKHDIGVLLVDFVIGYGATSDPAGALIQEIKKLNEKRGEANPLITIATITGTQEDPQNRSEQQKQLQDAGIIVMDTLPEVVLLAKELIQPHPVEAAAEISPLLNGISVINAGLRSFADDLQSSGTPVVHYQWAPVAGGNKKLAEILKKLK

Flanking regions ( +/- flanking 50bp)

GCAACTAGATATGTGCAGTTACATATATTAAATGCGTTAAGGATATTATAATGATCCATGCTTTTATTAAAAAAGGGAGCTTTCAGGATTCCGTCAGCCTGATGATAATTTCCCGAAAATTAAGTGAAGCCCCTGAGGTGGAAGAAATTTCCGTCATGATGGGAACACCAGCGAATAAATCTCTCCTTGATGTCACCGGTTTTTGGCATGACATTTTTAACGAAGCGACACCTAATGATATCTGTGTTTCGATTAAAGCTGAATCAGACGATCCCGCTATTATCGAGACTATCTCCAGTGCGTTAGAAGAAGCCTTAGCTGATATTGCTAACGGTCAAAAAAGTGGTAATAAATTAACCACTGTACGTAGCTGGCGTACGGCTAAACAAAAAAGTCCTAACGCTAATATGTTGCTTATTTCTATTGCCGGTGAGTATGCTGCAGAATTAGCTGATACGGGATTAGAAGATGGCTGTAATGTGATGCTATTTTCCGATAACGTCTCTATTGCTGATGAAAAAGCATTAAAAGAAAAAGCCGCCGCTAACGGATTGATAGTCATGGGGCCTGACTGTGGTACGGCAAATATTGCTGGCGCACCTTTAGCCTTTGCTAACATTGCACCGAAAGGCTCTATTGGTATCGTTGGTGCATCAGGGACAGGAATTCAAGAGATCACCTCACAAATTGTATTACAACGCCAAGGGGTTTCTCATGCAATAGGTCTGGGGGGACGAGATCTCAGCGAGCAAATTGGTGGCATTAGTGCTATCACGGCTATTAATATGCTGGCGGCAGATCCTCAAACCCGTGTGATTGCTTTTGTTTCTAAACCTCCCGCGCCTGCAGTACGTGAAAAAATTATTGCAGAAATGAAGCGTCATAATAAACCGATAGTGGCGCAATTCTTAGGAACAACACCAGAGAAATATCAAGACGATAATATCTATTTTACTCGCACCTTAGACGAAACGGCGCGTATTGCGGCTACGTTAGCACGTGTTGAAGATAGTGCTGCTCAGTTACCCAAAGTGGCAGGTAAAAAGATTATTGGATTATATGCGGGTGGAACATTAGCGGCAGAATGCGCGATGTTGTTATCTGAGCAACTCAATGTGGCGGTAGATAACGAACATAAGCAAGGTACGATGCTCGATGCACAAGGGCATAAAATTATTGATATGGGCGATGATTTTTATACCCAAGGCAAACCCCATCCAATGATAGATCCTTCTACTCGCAATAAATTTATTAGTGAATTAAGTAATAAGCATGATATTGGCGTATTACTGGTCGACTTTGTGATTGGTTATGGTGCAACGTCAGATCCAGCAGGTGCATTAATTCAAGAAATTAAAAAATTAAATGAAAAACGTGGTGAAGCTAATCCACTGATTACTATCGCCACTATTACCGGTACGCAGGAAGATCCTCAAAACCGTAGTGAGCAACAAAAACAGCTACAAGATGCAGGTATTATTGTGATGGATACCTTGCCAGAAGTCGTACTGTTAGCCAAAGAATTAATCCAGCCACATCCAGTAGAAGCCGCTGCTGAAATTTCACCACTTTTAAATGGGATCTCCGTGATCAACGCCGGATTACGCAGTTTTGCTGACGATCTGCAATCCAGTGGTACGCCTGTTGTTCATTATCAATGGGCACCTGTCGCAGGTGGTAATAAAAAACTGGCTGAAATATTAAAGAAATTGAAATAAGGAATTGCAGATATGTACTCAACTATCGAACAAGCGAATGAAGCAGTTAT