Orthogroup:group_1565


Homologs in group_1565

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10145 FBDBKF_10145 Morganella morganii S1 nrdI class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI
EHELCC_04945 EHELCC_04945 Morganella morganii S2 nrdI class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI
NLDBIP_04945 NLDBIP_04945 Morganella morganii S4 nrdI class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI
LHKJJB_13685 LHKJJB_13685 Morganella morganii S3 nrdI class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI
HKOGLL_12850 HKOGLL_12850 Morganella morganii S5 nrdI class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI
F4V73_RS00195 F4V73_RS00195 Morganella psychrotolerans nrdI class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI
PMI_RS02045 PMI_RS02045 Proteus mirabilis HI4320 nrdI class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI

Distribution of group_1565 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1565 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1565

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1565.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nrdI 7

Product

# Product Occurence
1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1780 7 F Nucleotide transport and metabolism (F) Flavodoxin NrdI, NrdF-interacting activator of class Ib ribonucleotide reductase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03647 7 protein involved in ribonucleotide reduction - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF07972 7 NrdI Flavodoxin like

Annotations of the 162 SwissProt hits

Annotation Number of occurrences
Phage protein nrdI 1
Protein NrdI 153
Putative NrdI-like protein 7
SPbeta prophage-derived protein NrdI 1

Protein length

Min length 134
Max length 140
Mean length (sd) 137.7 (1.8)
Median length 138.0

Protein length distribution