PF01909


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01909, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 16 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01909
Description Nucleotidyltransferase domain

Occurence in the database

PF01909 is associated with 16 different proteins (see tab "Protein list" and "Profile")
The 16 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1064 FBDBKF_06030 30838 33492 1 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD Morganella morganii S1
1 group_284 FBDBKF_06290 89919 90683 1 Polymerase nucleotidyl transferase domain-containing protein Morganella morganii S1
2 group_3670 FBDBKF_20540 634 1413 -1 aadA2 ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2 Morganella morganii S1
3 group_1064 EHELCC_09075 31410 34064 1 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD Morganella morganii S2
4 group_284 EHELCC_09335 90491 91255 1 Polymerase nucleotidyl transferase domain-containing protein Morganella morganii S2
5 group_1064 NLDBIP_09455 31410 34064 1 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD Morganella morganii S4
6 group_284 NLDBIP_09715 90491 91255 1 Polymerase nucleotidyl transferase domain-containing protein Morganella morganii S4
7 group_3670 NLDBIP_19865 1072 1851 1 aadA2 ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2 Morganella morganii S4
8 group_284 LHKJJB_08040 125983 126747 -1 Polymerase nucleotidyl transferase domain-containing protein Morganella morganii S3
9 group_1064 LHKJJB_08300 183174 185828 -1 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD Morganella morganii S3
10 group_3670 LHKJJB_19830 1304 2083 1 aadA2 ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2 Morganella morganii S3
11 group_284 HKOGLL_07590 125983 126747 -1 Polymerase nucleotidyl transferase domain-containing protein Morganella morganii S5
12 group_1064 HKOGLL_07850 183174 185828 -1 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD Morganella morganii S5
13 group_3670 HKOGLL_19690 634 1413 -1 aadA2 ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2 Morganella morganii S5
14 group_284 F4V73_RS15630 123411 124166 -1 nucleotidyltransferase domain-containing protein Morganella psychrotolerans
15 group_284 PMI_RS19645 2062726 2063010 -1 nucleotidyltransferase domain-containing protein Proteus mirabilis HI4320