Orthogroup:group_3667



Homologs in group_3667

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_20150 FBDBKF_20150 Morganella morganii S1 blaNDM-1 subclass B1 metallo-beta-lactamase NDM-1
NLDBIP_19595 NLDBIP_19595 Morganella morganii S4 blaNDM-1 subclass B1 metallo-beta-lactamase NDM-1
LHKJJB_19560 LHKJJB_19560 Morganella morganii S3 blaNDM-1 subclass B1 metallo-beta-lactamase NDM-1
HKOGLL_19475 HKOGLL_19475 Morganella morganii S5 blaNDM-1 subclass B1 metallo-beta-lactamase NDM-1

Distribution of group_3667 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3667 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3667

Orthogroup content: 4 members

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This page summarizes the annotation of all members of the orthologous group group_3667.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 blaNDM-1 4

Product

# Product Occurence
1 subclass B1 metallo-beta-lactamase NDM-1 4

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0491 4 R General function prediction only (R) Glyoxylase or a related metal-dependent hydrolase, beta-lactamase superfamily II

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K18780 4 metallo-beta-lactamase class B NDM [EC:3.5.2.6] beta-Lactam resistance Carbapenem resistance

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00753 4 Metallo-beta-lactamase superfamily

AMR gene Annotation(s)

Gene Occurences Description Scope Type Class Subclass HMM
blaNDM-1 4 subclass B1 metallo-beta-lactamase NDM-1 core AMR BETA-LACTAM CARBAPENEM NF000259 

Annotations of the 17 SwissProt hits

Annotation Number of occurrences
Endoribonuclease LACTB2 1
Metallo-beta-lactamase type 2 16

Protein length

Unique protein length 270

Protein length distribution