PF01595


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01595, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01595
Description Cyclin M transmembrane N-terminal domain

Occurence in the database

PF01595 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1380 FBDBKF_08530 85520 86890 -1 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family Morganella morganii S1
1 group_2038 FBDBKF_15290 66463 67755 -1 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains Morganella morganii S1
2 group_2038 EHELCC_10955 17151 18443 1 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains Morganella morganii S2
3 group_1380 EHELCC_12995 76835 78205 1 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family Morganella morganii S2
4 group_2038 NLDBIP_11300 17151 18443 1 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains Morganella morganii S4
5 group_1380 NLDBIP_13335 76835 78205 1 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family Morganella morganii S4
6 group_2038 LHKJJB_11160 17151 18443 1 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains Morganella morganii S3
7 group_1380 LHKJJB_13220 84238 85608 -1 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family Morganella morganii S3
8 group_2038 HKOGLL_09770 17151 18443 1 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains Morganella morganii S5
9 group_1380 HKOGLL_11810 76835 78205 1 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family Morganella morganii S5
10 group_1380 F4V73_RS09755 51927 53279 -1 hemolysin family protein Morganella psychrotolerans
11 group_2038 F4V73_RS12160 16483 17775 1 CNNM domain-containing protein Morganella psychrotolerans
12 group_2038 PMI_RS01845 434235 435509 -1 HlyC/CorC family transporter Proteus mirabilis HI4320
13 group_1380 PMI_RS16865 3712697 3714070 -1 hemolysin family protein Proteus mirabilis HI4320