PF01523


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01523, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01523
Description PmbA/TldA metallopeptidase domain 1

Occurence in the database

PF01523 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_741 FBDBKF_03295 58507 59847 -1 pmbA metalloprotease PmbA Morganella morganii S1
1 group_745 FBDBKF_03315 61332 62777 -1 tldD metalloprotease TldD Morganella morganii S1
2 group_745 EHELCC_07220 184326 185771 1 tldD metalloprotease TldD Morganella morganii S2
3 group_741 EHELCC_07240 187256 188596 1 pmbA metalloprotease PmbA Morganella morganii S2
4 group_745 NLDBIP_07545 184199 185644 1 tldD metalloprotease TldD Morganella morganii S4
5 group_741 NLDBIP_07565 187129 188469 1 pmbA metalloprotease PmbA Morganella morganii S4
6 group_745 LHKJJB_07080 147945 149390 1 tldD metalloprotease TldD Morganella morganii S3
7 group_741 LHKJJB_07100 150875 152215 1 pmbA metalloprotease PmbA Morganella morganii S3
8 group_741 HKOGLL_03830 81172 82512 -1 pmbA metalloprotease PmbA Morganella morganii S5
9 group_745 HKOGLL_03850 83997 85442 -1 tldD metalloprotease TldD Morganella morganii S5
10 group_745 F4V73_RS11620 477176 478621 1 tldD metalloprotease TldD Morganella psychrotolerans
11 group_741 F4V73_RS11640 480140 481480 1 pmbA metalloprotease PmbA Morganella psychrotolerans
12 group_745 PMI_RS18100 3977961 3979406 1 tldD metalloprotease TldD Proteus mirabilis HI4320
13 group_741 PMI_RS18120 3981125 3982453 1 pmbA metalloprotease PmbA Proteus mirabilis HI4320