Orthogroup:group_816


Homologs in group_816

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04090 FBDBKF_04090 Morganella morganii S1 recJ single-stranded-DNA-specific exonuclease RecJ
EHELCC_05380 EHELCC_05380 Morganella morganii S2 recJ single-stranded-DNA-specific exonuclease RecJ
NLDBIP_05700 NLDBIP_05700 Morganella morganii S4 recJ single-stranded-DNA-specific exonuclease RecJ
LHKJJB_02580 LHKJJB_02580 Morganella morganii S3 recJ single-stranded-DNA-specific exonuclease RecJ
HKOGLL_06055 HKOGLL_06055 Morganella morganii S5 recJ single-stranded-DNA-specific exonuclease RecJ
F4V73_RS08530 F4V73_RS08530 Morganella psychrotolerans recJ single-stranded-DNA-specific exonuclease RecJ
PMI_RS09910 PMI_RS09910 Proteus mirabilis HI4320 recJ single-stranded-DNA-specific exonuclease RecJ

Distribution of group_816 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_816 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_816

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_816.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 recJ 7

Product

# Product Occurence
1 single-stranded-DNA-specific exonuclease RecJ 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0608 7 L Replication, recombination and repair (L) ssDNA-specific exonuclease RecJ, DHH superfamily, may be involved in archaeal DNA replication intiation

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07462 7 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Base excision repair
Mismatch repair
Homologous recombination		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01368 7 DHH family
PF02272 7 DHHA1 domain
PF17768 7 RecJ OB domain

Annotations of the 8 SwissProt hits

Annotation Number of occurrences
Putative SPbeta prophage-derived single-strand DNA-specific exonuclease YorK 1
Putative single-strand DNA-specific exonuclease yorK 1
Single-stranded-DNA-specific exonuclease RecJ 6

Protein length

Unique protein length 577

Protein length distribution