Homologs in group_816

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03315 FBDBKF_03315 95.2 Morganella morganii S1 tldD metalloprotease TldD
EHELCC_07220 EHELCC_07220 95.2 Morganella morganii S2 tldD metalloprotease TldD
NLDBIP_07545 NLDBIP_07545 95.2 Morganella morganii S4 tldD metalloprotease TldD
LHKJJB_07080 LHKJJB_07080 95.2 Morganella morganii S3 tldD metalloprotease TldD
HKOGLL_03850 HKOGLL_03850 95.2 Morganella morganii S5 tldD metalloprotease TldD
PMI_RS18100 PMI_RS18100 80.9 Proteus mirabilis HI4320 tldD metalloprotease TldD

Distribution of the homologs in the orthogroup group_816

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_816

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AGH0 0.0 771 78 0 481 3 tldD Metalloprotease TldD homolog Shigella flexneri
P0AGG8 0.0 771 78 0 481 1 tldD Metalloprotease TldD Escherichia coli (strain K12)
P0AGG9 0.0 771 78 0 481 3 tldD Metalloprotease TldD Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P45297 0.0 699 71 2 480 3 tldD Metalloprotease TldD homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57478 0.0 639 60 1 483 3 tldD Metalloprotease TldD homolog Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8K9F2 0.0 621 60 1 483 3 tldD Metalloprotease TldD homolog Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89AE1 0.0 586 59 2 482 3 tldD Metalloprotease TldD homolog Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P74002 3.37e-71 237 34 7 460 3 slr1322 Metalloprotease slr1322 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q58403 6.09e-61 209 32 8 439 3 MJ0996 Metalloprotease MJ0996 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O26944 6.28e-57 198 30 9 471 3 MTH_856 Metalloprotease MTH_856 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
O29602 4.03e-42 158 28 12 433 3 AF_0655 Metalloprotease AF_0655 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q7LXP6 1.56e-37 145 26 16 476 1 tldD Zinc metalloprotease TldD homolog Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
P73754 3.53e-36 142 27 7 383 3 slr0863 Metalloprotease slr0863 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q57684 1.04e-12 73 32 4 164 4 MJ0231 Uncharacterized protein MJ0231 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P0AFK0 1.78e-11 69 22 10 408 1 pmbA Metalloprotease PmbA Escherichia coli (strain K12)
P0AFK1 1.78e-11 69 22 10 408 3 pmbA Metalloprotease PmbA Escherichia coli O157:H7
Q8KA30 1.92e-08 60 23 5 248 3 pmbA Metalloprotease PmbA homolog Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P45077 3.23e-07 56 23 14 410 3 pmbA Metalloprotease PmbA homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57191 0.000372 46 18 6 248 3 pmbA Metalloprotease PmbA homolog Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89AY6 0.001 45 23 3 172 3 pmbA Metalloprotease PmbA homolog Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11620
Feature type CDS
Gene tldD
Product metalloprotease TldD
Location 477176 - 478621 (strand: 1)
Length 1446 (nucleotides) / 481 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000002
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_816
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01523 PmbA/TldA metallopeptidase domain 1
PF19289 PmbA/TldA metallopeptidase C-terminal domain
PF19290 PmbA/TldA metallopeptidase central domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0312 General function prediction only (R) R Zn-dependent protease PmbA/TldA or its inactivated homolog

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03568 TldD protein - -

Protein Sequence

MSFSTVSNDLLTANGLDEQDLFSVLTQLADRHIDYGDLYFQNSFHEAWILEDKIIKNGSYNIDQGVGIRAVSGEKTGFAYSDQISLTALQQSASAARSIVREQGNGQVQALSRVNNTALYAALDPLRSMPREEKIALLHRLDRVARAEDPRVQEVNASLTGVYEEVLIAATDGTLATDIRPLVRLSVSVLVEEDGKREHGGSGGGGRFGYDYFLGTEDGEVRADNFAREAVRMALVNLSAVAAPAGSMPVVLGAGWPGVLLHEAVGHGLEGDFNRRNSSVFSGKIGQQVTSTLCTIVDDGTISDRRGSLAIDDEGVPGQYNVLIENGILKGYIQDKLNARLMGVAPTGNGRRESYAHMPMPRMTNTYMLAGESSPEEIIASVKNGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKITKPVKGATLIGSGIEAMQQVSMVGNDLKLDKGVGVCGKEGQSVPVGVGQPTLKLDSITVGGTA

Flanking regions ( +/- flanking 50bp)

CTCAGCTGACCTCGCTGATTGAGAAAAAAACGACAGGTAAAGAGTAAATTATGAGTTTTTCAACTGTTAGCAACGATCTGCTGACCGCCAATGGTCTTGATGAACAGGATTTGTTTTCTGTTCTCACTCAGTTGGCTGATCGTCATATTGATTACGGCGATCTCTATTTCCAGAACAGCTTCCATGAAGCCTGGATACTGGAAGATAAAATTATTAAAAACGGCTCTTATAATATCGACCAGGGTGTCGGGATCCGCGCCGTCAGCGGCGAGAAAACCGGGTTTGCCTATTCGGATCAGATAAGCCTCACTGCATTACAGCAGAGTGCTTCTGCGGCGCGCAGCATTGTGCGTGAGCAGGGAAATGGTCAGGTTCAGGCACTGAGTCGTGTGAATAACACCGCGCTGTATGCCGCACTCGACCCGCTGCGTTCTATGCCGCGTGAAGAGAAAATTGCCCTGCTGCACCGTCTTGATCGTGTGGCGCGGGCAGAAGATCCCCGTGTTCAGGAAGTGAATGCCAGCCTGACCGGTGTCTATGAAGAAGTGCTGATTGCCGCAACCGACGGCACGCTGGCGACGGATATTCGTCCGCTGGTGCGCCTTTCTGTCAGCGTGCTGGTGGAAGAGGATGGCAAACGCGAACACGGCGGCAGCGGTGGCGGTGGTCGTTTTGGTTATGACTATTTCCTCGGCACAGAAGACGGTGAAGTCCGCGCTGATAATTTTGCCCGCGAAGCCGTGCGTATGGCGCTGGTGAATCTCTCTGCGGTTGCCGCTCCGGCAGGTTCAATGCCTGTGGTATTAGGCGCAGGCTGGCCGGGTGTGTTACTGCATGAAGCTGTCGGACATGGACTGGAAGGTGATTTTAACCGCCGCAATTCCTCTGTATTCAGCGGAAAAATAGGTCAGCAGGTCACATCAACACTGTGCACGATTGTTGATGACGGCACCATCAGTGATCGCCGTGGCTCACTGGCGATTGATGATGAAGGCGTACCGGGTCAATACAACGTATTGATCGAAAACGGTATTCTGAAAGGATATATCCAGGACAAACTGAATGCGCGCCTGATGGGTGTCGCACCGACCGGTAACGGTCGCCGTGAATCCTATGCCCATATGCCGATGCCACGCATGACCAACACTTATATGCTGGCGGGTGAATCGTCGCCGGAAGAGATTATCGCGAGTGTGAAAAATGGTCTGTATGCCCCGAATTTCGGCGGCGGTCAGGTGGATATCACGTCCGGGAAATTCGTTTTCTCCACATCGGAAGCGTATCTCATTGAAAACGGTAAAATTACCAAACCGGTGAAAGGCGCAACACTGATTGGCTCGGGCATTGAAGCTATGCAGCAGGTTTCGATGGTCGGTAATGATCTGAAACTGGATAAAGGCGTGGGTGTCTGCGGAAAAGAGGGGCAGAGCGTCCCTGTCGGCGTCGGACAGCCTACGCTGAAGCTTGACAGTATCACAGTCGGCGGTACGGCGTAATGATGCAGAAGTACGGCACGCTGGTGATTGTCCTGATCGTTGCCGTTTCT