PF01514


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01514, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 15 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01514
Description Secretory protein of YscJ/FliF family

Occurence in the database

PF01514 is associated with 15 different proteins (see tab "Protein list" and "Profile")
The 15 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_451 FBDBKF_00590 97151 98857 1 fliF flagellar basal-body MS-ring/collar protein FliF Morganella morganii S1
1 group_319 FBDBKF_09375 105467 106204 1 sctJ type III secretion inner membrane ring lipoprotein SctJ Morganella morganii S1
2 group_451 EHELCC_00955 210011 211717 -1 fliF flagellar basal-body MS-ring/collar protein FliF Morganella morganii S2
3 group_319 EHELCC_10035 39900 40637 -1 sctJ type III secretion inner membrane ring lipoprotein SctJ Morganella morganii S2
4 group_451 NLDBIP_02505 468419 470125 1 fliF flagellar basal-body MS-ring/collar protein FliF Morganella morganii S4
5 group_319 NLDBIP_10380 18171 18908 -1 sctJ type III secretion inner membrane ring lipoprotein SctJ Morganella morganii S4
6 group_451 LHKJJB_04020 75660 77366 1 fliF flagellar basal-body MS-ring/collar protein FliF Morganella morganii S3
7 group_319 LHKJJB_10975 172620 173357 1 sctJ type III secretion inner membrane ring lipoprotein SctJ Morganella morganii S3
8 group_451 HKOGLL_03025 210216 211922 -1 fliF flagellar basal-body MS-ring/collar protein FliF Morganella morganii S5
9 group_319 HKOGLL_14035 105921 106658 1 sctJ type III secretion inner membrane ring lipoprotein SctJ Morganella morganii S5
10 group_451 F4V73_RS06600 1374065 1375774 1 fliF flagellar basal-body MS-ring/collar protein FliF Morganella psychrotolerans
11 group_319 F4V73_RS08395 1736419 1737198 1 sctJ type III secretion inner membrane ring lipoprotein SctJ Morganella psychrotolerans
12 group_319 F4V73_RS10590 248940 249680 -1 sctJ type III secretion inner membrane ring lipoprotein SctJ Morganella psychrotolerans
13 group_451 PMI_RS07960 1743252 1744973 1 fliF flagellar basal-body MS-ring/collar protein FliF Proteus mirabilis HI4320
14 group_319 PMI_RS13310 2952425 2953177 1 sctJ type III secretion inner membrane ring lipoprotein SctJ Proteus mirabilis HI4320