Homologs in group_451

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00590 FBDBKF_00590 92.8 Morganella morganii S1 fliF flagellar basal-body MS-ring/collar protein FliF
EHELCC_00955 EHELCC_00955 92.8 Morganella morganii S2 fliF flagellar basal-body MS-ring/collar protein FliF
NLDBIP_02505 NLDBIP_02505 92.8 Morganella morganii S4 fliF flagellar basal-body MS-ring/collar protein FliF
LHKJJB_04020 LHKJJB_04020 92.8 Morganella morganii S3 fliF flagellar basal-body MS-ring/collar protein FliF
HKOGLL_03025 HKOGLL_03025 92.8 Morganella morganii S5 fliF flagellar basal-body MS-ring/collar protein FliF
PMI_RS07960 PMI_RS07960 64.2 Proteus mirabilis HI4320 fliF flagellar basal-body MS-ring/collar protein FliF

Distribution of the homologs in the orthogroup group_451

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_451

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P25798 0.0 564 54 7 556 1 fliF Flagellar M-ring protein Escherichia coli (strain K12)
P15928 0.0 560 53 7 553 1 fliF Flagellar M-ring protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P57175 2.86e-116 358 36 9 548 3 fliF Flagellar M-ring protein Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8KA45 2.51e-110 343 33 8 568 3 fliF Flagellar M-ring protein Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89B00 4.11e-96 306 32 10 552 3 fliF Flagellar M-ring protein Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q51463 1.23e-94 304 40 15 484 3 fliF Flagellar M-ring protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O67241 6.64e-59 207 28 10 538 1 fliF Flagellar M-ring protein Aquifex aeolicus (strain VF5)
Q04954 6.48e-51 186 30 9 416 3 fliF Flagellar M-ring protein Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q53151 2.68e-49 182 32 7 409 3 fliF Flagellar M-ring protein Cereibacter sphaeroides
Q8FUS3 3.07e-46 174 26 12 570 3 fliF Flagellar M-ring protein FliF Brucella suis biovar 1 (strain 1330)
O52069 1.33e-45 172 25 11 570 3 fliF Flagellar M-ring protein Brucella abortus biovar 1 (strain 9-941)
Q8YDM4 1.4e-45 172 26 12 570 1 fliF Flagellar M-ring protein Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
O54239 8.47e-45 170 27 6 423 3 fliF Flagellar M-ring protein Rhizobium meliloti (strain 1021)
P23447 7.26e-31 130 28 5 296 3 fliF Flagellar M-ring protein Bacillus subtilis (strain 168)
Q44912 1.86e-17 89 22 8 404 3 fliF Flagellar M-ring protein Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
O83414 6.98e-12 71 20 14 491 3 fliF Flagellar M-ring protein Treponema pallidum (strain Nichols)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06600
Feature type CDS
Gene fliF
Product flagellar basal-body MS-ring/collar protein FliF
Location 1374065 - 1375774 (strand: 1)
Length 1710 (nucleotides) / 569 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_451
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01514 Secretory protein of YscJ/FliF family
PF08345 Flagellar M-ring protein C-terminal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1766 Cell motility (N)
Intracellular trafficking, secretion, and vesicular transport (U)		 NU Flagellar biosynthesis/type III secretory pathway M-ring protein FliF/YscJ

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02409 flagellar M-ring protein FliF Flagellar assembly -

Protein Sequence

MSAASQDTGDTKKGLALIIDRIKADPKVPLMIAGAAAIAIIVALFLWMRSPDYRVLLSNLSAKDGGDIVGQLTQMNMPYQLADNGSAILVPADKVHELRLKLAQAGLPKGGNTGFELLDKEQFGISQFSEQVNYQRALEGELSRTIESLSPVQTARVHLAIPKPTLFVREQKSPTASVTVGLLPGRALDEGQISAIVHMVSSSVSGLTTANVIIVDQAGRLLTNNDNSQQSVSTSQMKLTNETEARLKQRIEDLLSPLVGRANVQAQVTAQVDYSKVEQTAEEYKPNQQADTGAVRSRQSSQSQQNSNGGPGGVPGALSNQPVSAPAAPIETAKADNKDAKDNKTAPRADNNRNANINSQNDETTNYEVDRKISHTQRQIGVVDRLSVAVIINYLPQKAEDGTEEMKPLPPEMLKEIESLTREAMGYSVSRGDSLNITNTRFTDEGQITEEHSVFTSPVIIAQALDYGKILLLLLVGWLLWRRGIKPQWQRYRKAQQAESEARLFKATQMKTPLVADEALSDDMDEKTRRRLTRQRVSAEIQSQRIREMADKDPQVVAMVISQWLGKAQ

Flanking regions ( +/- flanking 50bp)

TTTCGCCAAAACTATTTTCACCCGTCAAATCTGCAAGGCAGGGAATGTTTATGAGTGCCGCATCACAAGACACCGGAGATACCAAAAAGGGATTAGCCCTGATTATTGACCGTATTAAGGCCGATCCGAAAGTTCCGCTGATGATCGCGGGTGCTGCCGCAATTGCGATTATTGTCGCACTGTTCCTCTGGATGCGAAGCCCGGATTACCGCGTGCTGCTCAGCAATCTGAGTGCAAAAGACGGCGGTGATATTGTCGGTCAGCTGACACAAATGAATATGCCGTATCAGCTCGCGGATAATGGCAGCGCCATTCTGGTGCCTGCGGATAAAGTCCACGAACTGCGTCTTAAACTGGCTCAGGCCGGTTTACCGAAAGGCGGCAATACCGGCTTTGAATTGCTGGACAAAGAGCAGTTCGGCATCAGCCAGTTCAGCGAACAGGTTAACTATCAGCGTGCCCTTGAAGGGGAGCTTTCCCGTACGATTGAATCACTCAGTCCGGTTCAGACCGCGCGGGTTCACCTCGCCATTCCGAAGCCGACTCTGTTTGTCCGCGAACAAAAATCCCCGACCGCATCCGTAACAGTCGGTTTGCTTCCCGGACGCGCCCTGGATGAAGGCCAGATAAGTGCCATTGTGCACATGGTTTCCAGCAGTGTTTCCGGATTAACAACCGCCAACGTGATTATTGTCGATCAGGCCGGACGCCTGCTCACCAACAATGATAACAGCCAGCAATCTGTCAGCACCTCACAGATGAAGCTGACGAATGAAACGGAAGCCCGTCTCAAACAGCGGATTGAAGACTTACTCTCCCCGCTGGTCGGTCGCGCCAACGTTCAGGCTCAGGTTACCGCACAGGTGGATTACTCCAAAGTCGAACAAACGGCTGAAGAGTACAAACCTAACCAGCAGGCGGATACCGGCGCAGTCCGTTCACGCCAGAGCAGCCAGAGTCAGCAAAACAGTAACGGCGGACCGGGCGGTGTGCCGGGCGCGTTATCTAACCAGCCGGTCAGCGCACCTGCTGCGCCGATAGAAACCGCAAAAGCGGATAATAAGGACGCGAAGGATAATAAAACAGCCCCGCGTGCCGATAATAACCGTAATGCCAATATTAATTCGCAGAACGATGAAACCACGAATTACGAAGTGGATCGCAAAATCAGCCATACCCAGCGTCAGATTGGTGTGGTCGATCGCCTCTCTGTAGCGGTCATCATTAACTATCTGCCGCAGAAAGCGGAAGACGGTACAGAAGAGATGAAACCGCTGCCGCCGGAGATGCTTAAAGAGATTGAATCGCTGACCCGTGAAGCAATGGGCTATTCCGTTTCGCGCGGTGACAGTCTGAATATCACCAACACCCGCTTTACGGATGAAGGTCAGATTACAGAAGAACACTCCGTCTTTACCAGTCCGGTGATTATCGCACAGGCGCTGGATTACGGAAAAATTCTGCTGCTGTTACTGGTTGGCTGGCTCCTGTGGCGTCGTGGTATCAAGCCACAATGGCAACGTTACCGCAAAGCACAGCAGGCTGAGAGCGAAGCCCGTCTGTTTAAAGCAACACAAATGAAAACGCCGCTCGTGGCTGATGAAGCCCTCAGTGACGATATGGACGAGAAAACCCGCCGTCGCCTGACCCGTCAGCGTGTCAGTGCCGAGATCCAGAGTCAGCGGATCCGTGAAATGGCAGATAAAGATCCGCAGGTTGTGGCAATGGTTATCAGCCAGTGGTTAGGAAAAGCACAATGAATTTAAGCGGAACAGAAAAGAGCGCCGTCATGCTGATGACGCTCGGTGAA