PF01512


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01512, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 20 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01512
Description Respiratory-chain NADH dehydrogenase 51 Kd subunit

Occurence in the database

PF01512 is associated with 20 different proteins (see tab "Protein list" and "Profile")
The 20 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_927 FBDBKF_05035 12151 14493 1 rsxC electron transport complex subunit RsxC Morganella morganii S1
1 group_2746 FBDBKF_07615 34404 35756 1 rnfC Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit Morganella morganii S1
2 group_1895 FBDBKF_14145 24720 26072 -1 nuoF NADH-quinone oxidoreductase subunit NuoF Morganella morganii S1
3 group_1895 EHELCC_08135 90913 92265 1 nuoF NADH-quinone oxidoreductase subunit NuoF Morganella morganii S2
4 group_927 EHELCC_12555 167001 169343 -1 rsxC electron transport complex subunit RsxC Morganella morganii S2
5 group_2746 EHELCC_13445 8598 9950 1 rnfC Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit Morganella morganii S2
6 group_1895 NLDBIP_08460 90913 92265 1 nuoF NADH-quinone oxidoreductase subunit NuoF Morganella morganii S4
7 group_927 NLDBIP_12895 166956 169298 -1 rsxC electron transport complex subunit RsxC Morganella morganii S4
8 group_2746 NLDBIP_13890 29473 30825 1 rnfC Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit Morganella morganii S4
9 group_1895 LHKJJB_05805 164894 166246 -1 nuoF NADH-quinone oxidoreductase subunit NuoF Morganella morganii S3
10 group_2746 LHKJJB_08960 128924 130276 -1 rnfC Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit Morganella morganii S3
11 group_927 LHKJJB_12755 167001 169343 -1 rsxC electron transport complex subunit RsxC Morganella morganii S3
12 group_1895 HKOGLL_05110 75504 76856 1 nuoF NADH-quinone oxidoreductase subunit NuoF Morganella morganii S5
13 group_2746 HKOGLL_08510 128924 130276 -1 rnfC Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit Morganella morganii S5
14 group_927 HKOGLL_11370 167001 169343 -1 rsxC electron transport complex subunit RsxC Morganella morganii S5
15 group_1895 F4V73_RS02790 588293 589645 1 nuoF NADH-quinone oxidoreductase subunit NuoF Morganella psychrotolerans
16 group_927 F4V73_RS05475 1163888 1165921 1 rsxC electron transport complex subunit RsxC Morganella psychrotolerans
17 group_2746 F4V73_RS13505 335006 336358 -1 SLBB domain-containing protein Morganella psychrotolerans
18 group_927 PMI_RS06300 1380196 1382715 1 rsxC electron transport complex subunit RsxC Proteus mirabilis HI4320
19 group_1895 PMI_RS08625 1883715 1885079 -1 nuoF NADH-quinone oxidoreductase subunit NuoF Proteus mirabilis HI4320