Homologs in group_1895

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14145 FBDBKF_14145 88.2 Morganella morganii S1 nuoF NADH-quinone oxidoreductase subunit NuoF
EHELCC_08135 EHELCC_08135 88.2 Morganella morganii S2 nuoF NADH-quinone oxidoreductase subunit NuoF
NLDBIP_08460 NLDBIP_08460 88.2 Morganella morganii S4 nuoF NADH-quinone oxidoreductase subunit NuoF
LHKJJB_05805 LHKJJB_05805 88.2 Morganella morganii S3 nuoF NADH-quinone oxidoreductase subunit NuoF
HKOGLL_05110 HKOGLL_05110 88.2 Morganella morganii S5 nuoF NADH-quinone oxidoreductase subunit NuoF
F4V73_RS02790 F4V73_RS02790 88.0 Morganella psychrotolerans nuoF NADH-quinone oxidoreductase subunit NuoF

Distribution of the homologs in the orthogroup group_1895

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1895

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P31979 0.0 783 84 2 447 1 nuoF NADH-quinone oxidoreductase subunit F Escherichia coli (strain K12)
P33901 0.0 783 83 2 447 3 nuoF NADH-quinone oxidoreductase subunit F Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q9I0J7 0.0 696 75 0 434 3 nuoF NADH-quinone oxidoreductase subunit F Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q8K9Y3 0.0 651 70 2 445 3 nuoF NADH-quinone oxidoreductase subunit F Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57256 0.0 629 68 4 444 3 nuoF NADH-quinone oxidoreductase subunit F Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89AU2 0.0 601 66 2 426 3 nuoF NADH-quinone oxidoreductase subunit F Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P56913 1.47e-137 404 49 3 414 3 nuoF2 NADH-quinone oxidoreductase subunit F 2 Rhizobium meliloti (strain 1021)
Q56222 1.24e-133 395 51 6 401 1 nqo1 NADH-quinone oxidoreductase subunit 1 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
P9WIV7 3.34e-132 391 48 7 426 1 nuoF NADH-quinone oxidoreductase subunit F Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WIV6 3.34e-132 391 48 7 426 3 nuoF NADH-quinone oxidoreductase subunit F Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P65568 3.34e-132 391 48 7 426 3 nuoF NADH-quinone oxidoreductase subunit F Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q9XAQ9 8.98e-132 390 47 5 414 3 nuoF NADH-quinone oxidoreductase subunit F Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
O66841 6.79e-111 336 46 7 397 1 nuoF NADH-quinone oxidoreductase subunit F Aquifex aeolicus (strain VF5)
Q92JB2 1.29e-106 325 43 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia conorii (strain ATCC VR-613 / Malish 7)
A8GQT6 2.32e-106 325 43 4 387 2 nuoF NADH-quinone oxidoreductase subunit F Rickettsia rickettsii (strain Sheila Smith)
P29913 2.37e-106 325 43 4 393 1 nqo1 NADH-quinone oxidoreductase chain 1 Paracoccus denitrificans
O52682 2.6e-106 331 43 3 400 1 hydB Bifurcating [FeFe] hydrogenase beta subunit Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q68XY3 5.4e-106 323 43 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia typhi (strain ATCC VR-144 / Wilmington)
A8F0M0 1.06e-105 323 43 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia massiliae (strain Mtu5)
Q9ZE33 1.46e-105 322 43 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia prowazekii (strain Madrid E)
Q0MQI4 2.74e-105 323 44 5 390 2 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Pongo pygmaeus
Q0MQI6 3.48e-105 323 44 5 390 2 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Pan troglodytes
Q46507 4.05e-105 324 42 5 404 1 hndC NADP-reducing hydrogenase subunit HndC Solidesulfovibrio fructosivorans
Q0MQI5 4.18e-105 323 44 5 390 2 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Gorilla gorilla gorilla
P49821 5.71e-105 322 44 5 390 1 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Homo sapiens
Q91YT0 6.43e-105 322 44 5 395 1 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Mus musculus
Q8HXQ9 8.42e-105 322 44 5 390 2 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Macaca fascicularis
Q4UKA6 1.79e-104 320 43 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
P25708 4.9e-104 320 44 5 390 1 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Bos taurus
P24917 2.08e-103 319 44 6 396 2 nuo-51 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
Q1RHA0 2.72e-103 317 43 5 388 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia bellii (strain RML369-C)
A8GYE0 2.72e-103 317 43 5 388 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia bellii (strain OSU 85-389)
A8EXI1 6.51e-103 316 42 5 390 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia canadensis (strain McKiel)
A8GM77 3.38e-102 314 42 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia akari (strain Hartford)
O07948 1.22e-101 313 43 5 378 3 nuoF NADH-quinone oxidoreductase subunit F Rhodobacter capsulatus
Q54I90 1.61e-101 314 42 6 404 2 ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Dictyostelium discoideum
Q9FNN5 3.42e-98 306 43 4 380 1 At5g08530 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Arabidopsis thaliana
P56912 6.61e-98 303 43 6 386 3 nuoF1 NADH-quinone oxidoreductase subunit F 1 Rhizobium meliloti (strain 1021)
Q92406 2.44e-97 304 42 5 383 3 NUO51 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial Aspergillus niger
P22317 5.67e-74 246 35 9 412 1 hoxF NAD-reducing hydrogenase HoxS subunit alpha Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
O94500 5.27e-65 219 33 6 403 3 SPBC18E5.10 NADH-ubiquinone oxidoreductase 51 kDa subunit homolog SPBC18E5.10, mitochondrial Schizosaccharomyces pombe (strain 972 / ATCC 24843)
H6LC32 7.04e-06 52 21 8 337 1 rnfC Na(+)-translocating ferredoxin:NAD(+) oxidoreductase complex subunit C Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655 / WB1)
D5ARZ1 2.01e-05 50 24 2 157 3 rnfC Ion-translocating oxidoreductase complex subunit C Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
Q52716 2.01e-05 50 24 2 157 1 rnfC Ion-translocating oxidoreductase complex subunit C Rhodobacter capsulatus
A8AH10 0.00032 47 30 1 103 3 rnfC Ion-translocating oxidoreductase complex subunit C Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
B2U2C8 0.000629 45 28 1 108 3 rsxC Ion-translocating oxidoreductase complex subunit C Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B1LEQ7 0.000682 45 28 1 108 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli (strain SMS-3-5 / SECEC)
A0A0H3AJC2 0.000728 45 33 2 84 3 rnfC Ion-translocating oxidoreductase complex subunit C Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
B7LQP1 0.0008 45 29 1 103 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q9KT88 0.0008 45 33 2 84 3 rnfC Ion-translocating oxidoreductase complex subunit C Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q1RBG7 0.000801 45 28 1 108 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli (strain UTI89 / UPEC)
B7MVA7 0.000801 45 28 1 108 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli O81 (strain ED1a)
B7M9Y3 0.000801 45 28 1 108 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli O45:K1 (strain S88 / ExPEC)
A1ABH4 0.000829 45 28 1 108 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli O1:K1 / APEC
Q74FU5 0.001 45 32 1 73 1 sfrB NADPH-Fe(3+) oxidoreductase subunit beta Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
D7AF64 0.001 45 32 1 73 3 sfrB NADPH-Fe(3+) oxidoreductase subunit beta Geobacter sulfurreducens (strain DL-1 / KN400)
B7NB83 0.001 45 28 1 108 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B7URX0 0.001 45 28 1 108 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q8FH95 0.001 45 28 1 108 3 rsxC Ion-translocating oxidoreductase complex subunit C Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS08625
Feature type CDS
Gene nuoF
Product NADH-quinone oxidoreductase subunit NuoF
Location 1883715 - 1885079 (strand: -1)
Length 1365 (nucleotides) / 454 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1895
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit
PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1894 Energy production and conversion (C) C NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit (chain F)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00335 NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] Oxidative phosphorylation
Metabolic pathways		 NADH:quinone oxidoreductase, prokaryotes

Protein Sequence

MTAISGAKPIIRSAETHPLTWRLRDDRQPVWLDEYRAKNGYKAAEKALKSMAPDEVTSEVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYILCNADEMEPGTYKDRLLMEELPHLLIEGMIIGAHALKAYRGYIFLRGEYIEAAKHLRHAIEEAKAAGFLGKNIFGSGIDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAIIEHGKDWYIGLSAGKSPDAGTKLMGFSGRVKYPGLWELPFGTTAREILEDYAGGMRDGLKLKAWQPGGAGTDFLTEDHLDLPMDFGTIAKAGSRLGTALAMAVDNEINMVSLTRNLEEFFARESCGWCTPCRDGLPWSVEILRAIEKGQGRPGDIETLEHLCRSLSPGHTFCAHAPGAVEPLQSAIKYFREEFEAGIIQEDYTNANLIRGIQPNLLKSRW

Flanking regions ( +/- flanking 50bp)

CACAGTTTTGTTAAACCTGAAGAGATTGAAACGTTACTGGAGCAGTATCCATGACAGCAATTTCAGGAGCAAAACCGATTATTCGTAGCGCAGAAACGCATCCGCTAACGTGGCGCTTACGTGATGATCGTCAGCCAGTATGGCTGGATGAATACCGTGCAAAAAACGGTTATAAAGCGGCAGAAAAAGCATTAAAAAGCATGGCACCCGATGAGGTGACCTCTGAAGTTAAAGATGCAGGCTTAAAAGGACGTGGTGGTGCTGGATTCTCAACAGGCTTGAAATGGAGCCTGATGCCAAAAGATGAAAGTATGAATATCCGTTACATCCTTTGTAATGCAGATGAAATGGAGCCGGGAACCTATAAAGACCGCCTGTTAATGGAAGAACTGCCACATCTGTTAATCGAAGGGATGATTATCGGTGCGCATGCACTGAAAGCTTATCGTGGTTATATTTTCCTACGTGGTGAATATATTGAAGCGGCTAAGCACCTGCGTCATGCTATTGAAGAAGCCAAAGCAGCGGGTTTTTTAGGCAAAAATATCTTCGGCTCTGGTATCGATTTTGAGCTATTTGTTCACACAGGAGCAGGTCGTTATATCTGTGGTGAAGAAACAGCACTGATCAACTCACTGGAAGGTCGTCGTGCTAACCCTCGCTCGAAACCGCCATTCCCTGCAACCTCCGGTGCTTGGGGAAAACCTACCTGCGTGAATAACGTTGAAACGCTGTGTAACGTACCCGCGATTATTGAGCATGGCAAAGATTGGTATATCGGTTTAAGCGCCGGTAAAAGTCCAGATGCAGGTACTAAATTAATGGGATTCTCTGGTCGCGTGAAATATCCAGGCTTATGGGAATTACCTTTTGGTACTACAGCTCGTGAAATCTTAGAAGATTATGCGGGGGGGATGCGTGATGGGCTGAAATTAAAAGCTTGGCAACCCGGTGGTGCAGGAACGGATTTCTTAACAGAAGATCATCTCGATCTCCCTATGGATTTTGGCACGATCGCCAAAGCTGGTAGCCGTTTAGGTACTGCGTTGGCGATGGCGGTAGATAATGAAATTAACATGGTTTCATTAACCCGTAACTTGGAAGAGTTCTTTGCGCGTGAATCTTGTGGCTGGTGTACACCTTGTCGTGATGGCTTGCCATGGAGTGTCGAAATCTTACGCGCGATAGAAAAAGGTCAAGGTCGTCCTGGTGATATTGAGACTCTTGAGCACCTCTGCCGCTCTTTAAGCCCAGGGCACACATTCTGTGCTCACGCACCAGGGGCAGTAGAGCCTTTACAAAGCGCAATCAAATATTTCCGTGAAGAATTTGAGGCTGGCATTATTCAAGAAGACTATACCAATGCCAATCTTATCCGTGGTATTCAGCCTAACTTGCTGAAAAGCCGCTGGTAGTTTTTCACGATACATTCTAGGTTTAACGCCTGCAATGCAGGCCTTTGGGA