PF00975


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00975, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00975
Description Thioesterase domain

Occurence in the database

PF00975 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3016 FBDBKF_17885 7413 16628 1 pksD Acyl transferase domain in polyketide synthase (PKS) enzymes Morganella morganii S1
1 group_3018 FBDBKF_17895 17716 18489 1 grsT Surfactin synthase thioesterase subunit Morganella morganii S1
2 group_3018 EHELCC_06440 17887 18660 -1 grsT Surfactin synthase thioesterase subunit Morganella morganii S2
3 group_3016 EHELCC_06450 19748 28963 -1 pksD Acyl transferase domain in polyketide synthase (PKS) enzymes Morganella morganii S2
4 group_3018 NLDBIP_06760 17760 18533 -1 grsT Surfactin synthase thioesterase subunit Morganella morganii S4
5 group_3016 NLDBIP_06770 19621 28836 -1 pksD Acyl transferase domain in polyketide synthase (PKS) enzymes Morganella morganii S4
6 group_3016 LHKJJB_18890 7421 16636 1 pksD Acyl transferase domain in polyketide synthase (PKS) enzymes Morganella morganii S3
7 group_3018 LHKJJB_18900 17724 18497 1 grsT Surfactin synthase thioesterase subunit Morganella morganii S3
8 group_3016 HKOGLL_04620 240805 250020 1 pksD Acyl transferase domain in polyketide synthase (PKS) enzymes Morganella morganii S5
9 group_3018 HKOGLL_04630 251108 251881 1 grsT Surfactin synthase thioesterase subunit Morganella morganii S5
10 group_3016 PMI_RS12840 2841064 2850279 1 type I polyketide synthase Proteus mirabilis HI4320
11 group_3018 PMI_RS12850 2851367 2852140 1 thioesterase domain-containing protein Proteus mirabilis HI4320