Orthogroup:group_3024


Homologs in group_3024

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17975 FBDBKF_17975 Morganella morganii S1 fimD Outer membrane usher protein FimD/PapC
EHELCC_06360 EHELCC_06360 Morganella morganii S2 fimD Outer membrane usher protein FimD/PapC
NLDBIP_06680 NLDBIP_06680 Morganella morganii S4 fimD Outer membrane usher protein FimD/PapC
LHKJJB_19280 LHKJJB_19280 Morganella morganii S3 fimD Outer membrane usher protein FimD/PapC
HKOGLL_04710 HKOGLL_04710 Morganella morganii S5 fimD Outer membrane usher protein FimD/PapC
PMI_RS19090 PMI_RS19090 Proteus mirabilis HI4320 - FimD/PapC N-terminal domain-containing protein

Distribution of group_3024 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3024 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3024

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3024.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fimD 5
2 - 1

Product

# Product Occurence
1 Outer membrane usher protein FimD/PapC 5
2 FimD/PapC N-terminal domain-containing protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3188 6 NW Cell motility (N)
Extracellular structures (W)		 Outer membrane usher protein FimD/PapC

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13954 6 PapC N-terminal domain

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG042617 6 fimbrial biogenesis outer membrane usher protein VF1235 Adherence

Annotations of the 1 SwissProt hits

Annotation Number of occurrences
Outer membrane usher protein SfmD 1

Protein length

Min length 67
Max length 72
Mean length (sd) 71.2 (2.0)
Median length 72.0

Protein length distribution