PF00970


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00970, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 28 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00970
Description Oxidoreductase FAD-binding domain

Occurence in the database

PF00970 is associated with 28 different proteins (see tab "Protein list" and "Profile")
The 28 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_532 FBDBKF_01165 217159 218340 1 hmpA NO-inducible flavohemoprotein Morganella morganii S1
1 group_886 FBDBKF_04560 106905 107912 -1 hcr NADH oxidoreductase Morganella morganii S1
2 group_1767 FBDBKF_12295 121019 121768 1 fpr ferredoxin--NADP(+) reductase Morganella morganii S1
3 group_2019 FBDBKF_15155 41329 42555 1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella morganii S1
4 group_532 EHELCC_00380 90528 91709 -1 hmpA NO-inducible flavohemoprotein Morganella morganii S2
5 group_886 EHELCC_05850 166362 167369 -1 hcr NADH oxidoreductase Morganella morganii S2
6 group_2019 EHELCC_11090 42351 43577 -1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella morganii S2
7 group_1767 EHELCC_14010 12937 13686 -1 fpr ferredoxin--NADP(+) reductase Morganella morganii S2
8 group_532 NLDBIP_03080 588427 589608 1 hmpA NO-inducible flavohemoprotein Morganella morganii S4
9 group_886 NLDBIP_06170 207427 208434 -1 hcr NADH oxidoreductase Morganella morganii S4
10 group_2019 NLDBIP_11435 42351 43577 -1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella morganii S4
11 group_1767 NLDBIP_15105 16874 17623 -1 fpr ferredoxin--NADP(+) reductase Morganella morganii S4
12 group_886 LHKJJB_03050 184951 185958 -1 hcr NADH oxidoreductase Morganella morganii S3
13 group_532 LHKJJB_04595 195668 196849 1 hmpA NO-inducible flavohemoprotein Morganella morganii S3
14 group_2019 LHKJJB_11295 42351 43577 -1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella morganii S3
15 group_1767 LHKJJB_15505 121019 121768 1 fpr ferredoxin--NADP(+) reductase Morganella morganii S3
16 group_532 HKOGLL_02450 90733 91914 -1 hmpA NO-inducible flavohemoprotein Morganella morganii S5
17 group_886 HKOGLL_06525 106815 107822 -1 hcr NADH oxidoreductase Morganella morganii S5
18 group_2019 HKOGLL_09905 42351 43577 -1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella morganii S5
19 group_1767 HKOGLL_14625 107682 108431 1 fpr ferredoxin--NADP(+) reductase Morganella morganii S5
20 group_532 F4V73_RS07240 1506216 1507397 1 hmpA NO-inducible flavohemoprotein Morganella psychrotolerans
21 group_886 F4V73_RS09015 1881788 1882795 -1 hcr NADH oxidoreductase Morganella psychrotolerans
22 group_2019 F4V73_RS12290 42058 43284 -1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella psychrotolerans
23 group_1767 F4V73_RS17125 55386 56135 1 fpr ferredoxin--NADP(+) reductase Morganella psychrotolerans
24 group_2019 PMI_RS01710 406425 407651 1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Proteus mirabilis HI4320
25 group_532 PMI_RS09220 2009521 2010711 1 hmpA NO-inducible flavohemoprotein Proteus mirabilis HI4320
26 group_886 PMI_RS10400 2282582 2283586 -1 hcr NADH oxidoreductase Proteus mirabilis HI4320
27 group_1767 PMI_RS15865 3522004 3522750 -1 fpr ferredoxin--NADP(+) reductase Proteus mirabilis HI4320