Orthogroup:group_1806



Homologs in group_1806

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13400 FBDBKF_13400 Morganella morganii S1 pheT phenylalanine--tRNA ligase subunit beta
EHELCC_08695 EHELCC_08695 Morganella morganii S2 pheT phenylalanine--tRNA ligase subunit beta
NLDBIP_09020 NLDBIP_09020 Morganella morganii S4 pheT phenylalanine--tRNA ligase subunit beta
LHKJJB_05245 LHKJJB_05245 Morganella morganii S3 pheT phenylalanine--tRNA ligase subunit beta
HKOGLL_05670 HKOGLL_05670 Morganella morganii S5 pheT phenylalanine--tRNA ligase subunit beta
F4V73_RS03360 F4V73_RS03360 Morganella psychrotolerans pheT phenylalanine--tRNA ligase subunit beta
PMI_RS05050 PMI_RS05050 Proteus mirabilis HI4320 pheT phenylalanine--tRNA ligase subunit beta

Distribution of group_1806 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1806 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1806

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1806.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 pheT 7

Product

# Product Occurence
1 phenylalanine--tRNA ligase subunit beta 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0072 7 J Translation, ribosomal structure and biogenesis (J) Phenylalanyl-tRNA synthetase beta subunit

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01890 7 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Aminoacyl-tRNA biosynthesis -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01588 7 Putative tRNA binding domain
PF03147 7 Ferredoxin-fold anticodon binding domain
PF03483 7 B3/4 domain
PF03484 7 tRNA synthetase B5 domain
PF17759 7 Phenylalanyl tRNA synthetase beta chain CLM domain

Annotations of the 343 SwissProt hits

Annotation Number of occurrences
Phenylalanine--tRNA ligase beta subunit 332
Phenylalanine--tRNA ligase beta subunit, chloroplastic 4
Phenylalanine--tRNA ligase beta subunit, cytoplasmic 1
Probable phenylalanine--tRNA ligase beta subunit 3
Putative tRNA-binding protein YtpR 1
Uncharacterized protein MG449 1
Uncharacterized protein MG449 homolog 1

Protein length

Unique protein length 795

Protein length distribution