PF00679


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00679, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00679
Description Elongation factor G C-terminus

Occurence in the database

PF00679 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_561 FBDBKF_01425 277969 279768 -1 lepA translation elongation factor 4 Morganella morganii S1
1 group_1682 FBDBKF_11740 220 2346 -1 fusA elongation factor G Morganella morganii S1
2 group_1733 FBDBKF_12095 72044 73864 -1 typA ribosome-dependent GTPase TypA Morganella morganii S1
3 group_561 EHELCC_00120 29100 30899 1 lepA translation elongation factor 4 Morganella morganii S2
4 group_1733 EHELCC_14210 60841 62661 1 typA ribosome-dependent GTPase TypA Morganella morganii S2
5 group_1682 EHELCC_14565 132359 134485 1 fusA elongation factor G Morganella morganii S2
6 group_561 NLDBIP_03340 649237 651036 -1 lepA translation elongation factor 4 Morganella morganii S4
7 group_1733 NLDBIP_15305 64778 66598 1 typA ribosome-dependent GTPase TypA Morganella morganii S4
8 group_1682 NLDBIP_15665 136296 138422 1 fusA elongation factor G Morganella morganii S4
9 group_561 LHKJJB_04855 256478 258277 -1 lepA translation elongation factor 4 Morganella morganii S3
10 group_1682 LHKJJB_14950 220 2346 -1 fusA elongation factor G Morganella morganii S3
11 group_1733 LHKJJB_15305 72044 73864 -1 typA ribosome-dependent GTPase TypA Morganella morganii S3
12 group_561 HKOGLL_02190 29305 31104 1 lepA translation elongation factor 4 Morganella morganii S5
13 group_1733 HKOGLL_14425 58707 60527 -1 typA ribosome-dependent GTPase TypA Morganella morganii S5
14 group_1682 HKOGLL_19340 11005 13131 1 fusA elongation factor G Morganella morganii S5
15 group_561 F4V73_RS01970 428770 430566 1 lepA translation elongation factor 4 Morganella psychrotolerans
16 group_1733 F4V73_RS14550 140366 142186 1 typA translational GTPase TypA Morganella psychrotolerans
17 group_1682 F4V73_RS14920 215921 218047 1 fusA elongation factor G Morganella psychrotolerans
18 group_561 PMI_RS09330 2036340 2038136 -1 lepA translation elongation factor 4 Proteus mirabilis HI4320
19 group_1682 PMI_RS13795 3067184 3069298 -1 fusA elongation factor G Proteus mirabilis HI4320
20 group_1733 PMI_RS14240 3158166 3160001 -1 typA ribosome-dependent GTPase TypA Proteus mirabilis HI4320