Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00557, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains
within the database. 35 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.
Description
External link | PF00557 |
---|---|
Description | Metallopeptidase family M24 |
Occurence in the database
PF00557 is associated with 35 different proteins (see tab "Protein list" and "Profile") |
The 35 proteins are classified into 5 different orthogroup(s) |
# | Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism |
---|---|---|---|---|---|---|---|---|
0 | group_541 | FBDBKF_01260 | 242336 | 243112 | -1 | map | type I methionyl aminopeptidase | Morganella morganii S1 |
1 | group_827 | FBDBKF_04155 | 17461 | 18780 | -1 | pepP | Xaa-Pro aminopeptidase | Morganella morganii S1 |
2 | group_1063 | FBDBKF_06020 | 29163 | 29960 | 1 | map | type I methionyl aminopeptidase | Morganella morganii S1 |
3 | group_2205 | FBDBKF_16880 | 2814 | 4148 | -1 | pepQ | Xaa-Pro dipeptidase | Morganella morganii S1 |
4 | group_2440 | FBDBKF_19945 | 8605 | 9876 | -1 | pepP | Xaa-Pro aminopeptidase | Morganella morganii S1 |
5 | group_541 | EHELCC_00285 | 65756 | 66532 | 1 | map | type I methionyl aminopeptidase | Morganella morganii S2 |
6 | group_827 | EHELCC_05445 | 76918 | 78237 | -1 | pepP | Xaa-Pro aminopeptidase | Morganella morganii S2 |
7 | group_2440 | EHELCC_07670 | 5546 | 6817 | 1 | pepP | Xaa-Pro aminopeptidase | Morganella morganii S2 |
8 | group_1063 | EHELCC_09065 | 29735 | 30532 | 1 | map | type I methionyl aminopeptidase | Morganella morganii S2 |
9 | group_2205 | EHELCC_19550 | 7310 | 8644 | 1 | pepQ | Xaa-Pro dipeptidase | Morganella morganii S2 |
10 | group_541 | NLDBIP_03175 | 613604 | 614380 | -1 | map | type I methionyl aminopeptidase | Morganella morganii S4 |
11 | group_827 | NLDBIP_05765 | 117983 | 119302 | -1 | pepP | Xaa-Pro aminopeptidase | Morganella morganii S4 |
12 | group_2440 | NLDBIP_07995 | 5546 | 6817 | 1 | pepP | Xaa-Pro aminopeptidase | Morganella morganii S4 |
13 | group_1063 | NLDBIP_09445 | 29735 | 30532 | 1 | map | type I methionyl aminopeptidase | Morganella morganii S4 |
14 | group_2205 | NLDBIP_16920 | 64362 | 65696 | 1 | pepQ | Xaa-Pro dipeptidase | Morganella morganii S4 |
15 | group_827 | LHKJJB_02645 | 95507 | 96826 | -1 | pepP | Xaa-Pro aminopeptidase | Morganella morganii S3 |
16 | group_541 | LHKJJB_04690 | 220845 | 221621 | -1 | map | type I methionyl aminopeptidase | Morganella morganii S3 |
17 | group_2440 | LHKJJB_06270 | 250342 | 251613 | -1 | pepP | Xaa-Pro aminopeptidase | Morganella morganii S3 |
18 | group_1063 | LHKJJB_08310 | 186706 | 187503 | -1 | map | type I methionyl aminopeptidase | Morganella morganii S3 |
19 | group_2205 | LHKJJB_16550 | 2814 | 4148 | -1 | pepQ | Xaa-Pro dipeptidase | Morganella morganii S3 |
20 | group_541 | HKOGLL_02355 | 65961 | 66737 | 1 | map | type I methionyl aminopeptidase | Morganella morganii S5 |
21 | group_827 | HKOGLL_06120 | 17371 | 18690 | -1 | pepP | Xaa-Pro aminopeptidase | Morganella morganii S5 |
22 | group_1063 | HKOGLL_07860 | 186706 | 187503 | -1 | map | type I methionyl aminopeptidase | Morganella morganii S5 |
23 | group_2205 | HKOGLL_17515 | 2814 | 4148 | -1 | pepQ | Xaa-Pro dipeptidase | Morganella morganii S5 |
24 | group_2440 | HKOGLL_19125 | 8611 | 9882 | -1 | pepP | Xaa-Pro aminopeptidase | Morganella morganii S5 |
25 | group_2440 | F4V73_RS02420 | 511894 | 513165 | 1 | M24 family metallopeptidase | Morganella psychrotolerans | |
26 | group_541 | F4V73_RS07300 | 1523345 | 1524121 | -1 | map | type I methionyl aminopeptidase | Morganella psychrotolerans |
27 | group_827 | F4V73_RS08600 | 1776790 | 1778109 | -1 | pepP | Xaa-Pro aminopeptidase | Morganella psychrotolerans |
28 | group_1063 | F4V73_RS15880 | 183247 | 184044 | -1 | map | type I methionyl aminopeptidase | Morganella psychrotolerans |
29 | group_2205 | F4V73_RS18350 | 2932 | 4266 | -1 | pepQ | Xaa-Pro dipeptidase | Morganella psychrotolerans |
30 | group_541 | PMI_RS04840 | 1061544 | 1062320 | 1 | map | type I methionyl aminopeptidase | Proteus mirabilis HI4320 |
31 | group_2440 | PMI_RS09205 | 2005210 | 2006478 | -1 | M24 family metallopeptidase | Proteus mirabilis HI4320 | |
32 | group_827 | PMI_RS09980 | 2164429 | 2165739 | -1 | pepP | Xaa-Pro aminopeptidase | Proteus mirabilis HI4320 |
33 | group_1063 | PMI_RS11290 | 2484902 | 2485699 | 1 | map | type I methionyl aminopeptidase | Proteus mirabilis HI4320 |
34 | group_2205 | PMI_RS17645 | 3872453 | 3873787 | 1 | pepQ | Xaa-Pro dipeptidase | Proteus mirabilis HI4320 |