Homologs in group_2440

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19945 FBDBKF_19945 92.7 Morganella morganii S1 pepP Xaa-Pro aminopeptidase
EHELCC_07670 EHELCC_07670 92.7 Morganella morganii S2 pepP Xaa-Pro aminopeptidase
NLDBIP_07995 NLDBIP_07995 92.7 Morganella morganii S4 pepP Xaa-Pro aminopeptidase
LHKJJB_06270 LHKJJB_06270 92.7 Morganella morganii S3 pepP Xaa-Pro aminopeptidase
HKOGLL_19125 HKOGLL_19125 92.7 Morganella morganii S5 pepP Xaa-Pro aminopeptidase
PMI_RS09205 PMI_RS09205 79.4 Proteus mirabilis HI4320 - M24 family metallopeptidase

Distribution of the homologs in the orthogroup group_2440

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2440

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P9WHS7 1.95e-07 56 25 9 249 1 pepE Probable dipeptidase PepE Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WHS6 1.95e-07 56 25 9 249 3 pepE Probable dipeptidase PepE Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P65811 1.95e-07 56 25 9 249 3 pepE Probable dipeptidase PepE Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
O58885 1.45e-06 53 25 14 308 1 pepQ Xaa-Pro dipeptidase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
P81535 1.29e-05 50 23 12 292 1 pepQ Xaa-Pro dipeptidase Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Q01662 7.11e-05 48 22 10 284 1 MAP1 Methionine aminopeptidase 1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02420
Feature type CDS
Gene -
Product M24 family metallopeptidase
Location 511894 - 513165 (strand: 1)
Length 1272 (nucleotides) / 423 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2440
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00557 Metallopeptidase family M24

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0006 Amino acid transport and metabolism (E) E Xaa-Pro aminopeptidase

Protein Sequence

MKTLRSAIPDSFSLQERDRRWELARDIMRQRDLDVLIVYGDRESAAPAPFCVDHYFTNDRLGSVVIFYQDNDPIVVTFAPMMIADHMQAAMRGDCQWLSPEQIMVGKTGRNIGALLKEINVPATAQIGVIGLEPYPPFYFDGAMPFNTLTGIKEAYPQASIVPVYRDFFVRASVKSEEELVHIRHAAAIGEAMSDIMRVTAVPGNSEADIAAAVTATCLSAGGFTAEILLGSGPEYIGWGQPAWQYRSQRPREIERGDIVLSEIFALYGMYETQHQAAVAVGKIHPELEKAALVARECYEIGVNYLKEGVTFGEVVDEMEKPLLASGGWHVHPLIHSINPYGPIGFGTAPGIESLPLVSRYRKVERLPNPGRELVLQAGMSFAFEPNCAFGYHLCNLGGTVIVGKNAGIELNDNSTRLMRADI

Flanking regions ( +/- flanking 50bp)

ATTGACTACGATATTAGTTCATTCAAATGAATTAATTTGTGGAGTCGATAATGAAAACATTACGTTCTGCTATACCGGATAGTTTTTCTTTACAGGAGCGGGATCGCCGCTGGGAGCTGGCACGTGACATCATGCGTCAACGTGATTTAGATGTTTTGATTGTTTATGGTGACCGGGAATCAGCGGCACCTGCACCTTTCTGTGTGGATCACTATTTTACCAATGATCGTCTGGGGTCGGTGGTGATTTTTTATCAGGATAACGACCCGATCGTGGTGACATTTGCACCGATGATGATAGCTGACCATATGCAGGCCGCCATGCGGGGTGATTGCCAGTGGTTATCGCCGGAGCAGATCATGGTCGGAAAAACCGGGCGCAATATCGGCGCATTACTGAAAGAGATTAATGTCCCGGCGACAGCGCAAATCGGGGTGATCGGGCTTGAGCCATATCCGCCGTTTTATTTTGATGGTGCGATGCCGTTCAATACCTTAACCGGGATTAAAGAAGCGTATCCACAGGCGTCGATTGTGCCGGTTTACCGGGACTTTTTTGTCCGCGCATCAGTAAAAAGTGAGGAAGAACTGGTACATATCCGTCATGCGGCAGCCATTGGCGAGGCAATGAGTGACATCATGCGGGTGACGGCAGTACCGGGCAACAGCGAGGCCGATATTGCTGCGGCAGTAACGGCAACATGTCTTTCTGCCGGCGGGTTCACGGCTGAAATTCTGCTTGGATCAGGACCTGAATATATCGGTTGGGGACAACCGGCCTGGCAGTATCGCTCTCAGCGCCCACGTGAAATTGAGCGTGGTGATATTGTATTGTCAGAGATTTTCGCACTGTATGGGATGTATGAAACACAGCACCAGGCGGCTGTTGCCGTCGGTAAAATTCATCCGGAACTGGAAAAAGCGGCACTGGTTGCGCGGGAATGTTATGAAATAGGCGTAAACTATCTCAAAGAGGGCGTGACGTTCGGGGAAGTGGTTGATGAGATGGAAAAACCATTACTCGCTTCCGGTGGCTGGCATGTGCATCCACTCATTCACAGCATCAATCCTTACGGACCAATCGGTTTCGGGACAGCACCGGGCATTGAATCTCTGCCGCTGGTGAGTCGTTACCGCAAAGTTGAGCGTTTACCAAACCCCGGCCGTGAACTGGTTCTGCAGGCAGGAATGAGCTTTGCGTTTGAACCAAACTGCGCCTTTGGCTATCATCTGTGTAACTTGGGCGGCACAGTGATTGTCGGGAAAAACGCCGGGATTGAACTCAACGATAACTCGACCAGACTGATGCGCGCTGATATCTGACATTCTGATGGGTAACCGCAGTATATGCAAAAAACGAATAAGCACACCGT